RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 MCTP1Q6DN14 999 aa23.15■■□□□ 1.3
FOXN3-209ENST00000555353 FAM20AQ96MK3 541 aa23.15■■□□□ 1.3
FOXN3-209ENST00000555353 PCYT2Q99447 389 aa23.15■■□□□ 1.3
FOXN3-209ENST00000555353 RNPEPQ9H4A4 650 aa23.15■■□□□ 1.3
FOXN3-209ENST00000555353 PCDHA10Q9Y5I2 948 aa23.15■■□□□ 1.3
FOXN3-209ENST00000555353 WDR64B1ANS9 1081 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 TBX3O15119 743 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 CHMP2AO43633 222 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 PSMD10O75832 226 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 BRD1O95696 1058 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 PSAPP07602 524 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 GNAT1P11488 350 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 PLPPR4Q7Z2D5 763 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 POTEDQ86YR6 584 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 GDF15Q99988 308 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 KCNMB3Q9NPA1 279 aa23.14■■□□□ 1.3
FOXN3-209ENST00000555353 U2AF2P26368 475 aaKnown RBP eCLIP23.14■■□□□ 1.291e-6■■■□□ 15.9
FOXN3-209ENST00000555353 SFNP31947 248 aa23.14■■□□□ 1.29
FOXN3-209ENST00000555353 SLC26A2P50443 739 aa23.14■■□□□ 1.29
FOXN3-209ENST00000555353 SWSAP1Q6NVH7 229 aa23.14■■□□□ 1.29
FOXN3-209ENST00000555353 TNPO1Q92973 898 aaKnown RBP23.14■■□□□ 1.29
FOXN3-209ENST00000555353 NOC4LQ9BVI4 516 aaKnown RBP23.14■■□□□ 1.29
FOXN3-209ENST00000555353 ZNF302Q9NR11 478 aa23.14■■□□□ 1.29
FOXN3-209ENST00000555353 DISC1Q9NRI5 854 aa23.14■■□□□ 1.29
FOXN3-209ENST00000555353 NOL7Q9UMY1 257 aaKnown RBP23.14■■□□□ 1.29
FOXN3-209ENST00000555353 IGKV6D-21A0A0A0MT36 114 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 KIF28PB7ZC32 967 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 NEMFO60524 1076 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 BAG4O95429 457 aaKnown RBP23.13■■□□□ 1.29
FOXN3-209ENST00000555353 CYP2C18P33260 490 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 JAK3P52333 1124 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 BFSP2Q13515 415 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 PKP1Q13835 747 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 CCDC60Q8IWA6 550 aaPredicted RBP23.13■■□□□ 1.29
FOXN3-209ENST00000555353 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 CCDC155Q8N6L0 562 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 ATP6V0A1Q93050 837 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 UBE2OQ9C0C9 1292 aaKnown RBP23.13■■□□□ 1.29
FOXN3-209ENST00000555353 UNC45AQ9H3U1 944 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 ZSCAN16Q9H4T2 348 aaPredicted RBP23.13■■□□□ 1.29
FOXN3-209ENST00000555353 SETD4Q9NVD3 440 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 TRPC6Q9Y210 931 aa23.13■■□□□ 1.29
FOXN3-209ENST00000555353 ZNF200P98182 395 aaPredicted RBP23.12■■□□□ 1.29
FOXN3-209ENST00000555353 PPFIA1Q13136 1202 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 MFSD5Q6N075 450 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 PDXDC2PQ6P474 469 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 TMEM199Q8N511 208 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 AFAP1L1Q8TED9 768 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 NRCAMQ92823 1304 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 COLQQ9Y215 455 aaPredicted RBP23.12■■□□□ 1.29
FOXN3-209ENST00000555353 ATP6V1DQ9Y5K8 247 aa23.12■■□□□ 1.29
FOXN3-209ENST00000555353 MCM7P33993 719 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 FPGSQ05932 587 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 CALCRLQ16602 461 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 MIER3Q7Z3K6 550 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 RDM1Q8NG50 284 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 HAS1Q92839 578 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 CTAGE1Q96RT6 745 aa23.11■■□□□ 1.29
FOXN3-209ENST00000555353 UMODL1Q5DID0 1318 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 RANBP2P49792 3224 aaKnown RBP23.1■■□□□ 1.29
FOXN3-209ENST00000555353 WNT7AO00755 349 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 F13A1P00488 732 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 HOXC8P31273 242 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 BMP8BP34820 402 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 TRAPPC10P48553 1259 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 PTK7Q13308 1070 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 HIC1Q14526 733 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 PLCB4Q15147 1175 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 FOXD4L5Q5VV16 416 aaPredicted RBP23.1■■□□□ 1.29
FOXN3-209ENST00000555353 CKAP2LQ8IYA6 745 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 RETREG2Q8NC44 543 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 CAGE1Q8TC20 777 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 LMBR1Q8WVP7 490 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 FOXD4L4Q8WXT5 416 aaPredicted RBP23.1■■□□□ 1.29
FOXN3-209ENST00000555353 GABBR1Q9UBS5 961 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 POTEB3A0JP26 581 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 PITPNM1O00562 1244 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 GRIK4Q16099 956 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 TTC38Q5R3I4 469 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 POTEBQ6S5H4 581 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 BRAPQ7Z569 592 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 FERMT3Q86UX7 667 aa23.1■■□□□ 1.29
FOXN3-209ENST00000555353 MAFBQ9Y5Q3 323 aaPredicted RBP23.1■■□□□ 1.29
FOXN3-209ENST00000555353 TREHO43280 583 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 CCL23P55773 120 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 PPP2R5CQ13362 524 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 ORC2Q13416 577 aaPredicted RBP23.09■■□□□ 1.29
FOXN3-209ENST00000555353 B3GNT9Q6UX72 402 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 SERINC5Q86VE9 423 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 ATP8B4Q8TF62 1192 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 PRO3102Q9H379 93 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 VAV3Q9UKW4 847 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 ZDHHC9Q9Y397 364 aa23.09■■□□□ 1.29
FOXN3-209ENST00000555353 TRIOBPQ9H2D6 2365 aa23.08■■□□□ 1.29
FOXN3-209ENST00000555353 RRN3P2A6NIE6 340 aa23.08■■□□□ 1.29
FOXN3-209ENST00000555353 INSRRP14616 1297 aa23.08■■□□□ 1.29
FOXN3-209ENST00000555353 IGBP1P78318 339 aa23.08■■□□□ 1.29
FOXN3-209ENST00000555353 PPIGQ13427 754 aaKnown RBP eCLIP23.08■■□□□ 1.296e-8■□□□□ 10.1
FOXN3-209ENST00000555353 ZNF174Q15697 407 aa23.08■■□□□ 1.29
FOXN3-209ENST00000555353 WNT8AQ9H1J5 351 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms