RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 HOXD8P13378 290 aaPredicted RBP11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF76P36508 570 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 CCL23P55773 120 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 PTPAQ15257 358 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 TMEM240Q5SV17 173 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 B3GNT9Q6UX72 402 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 TMEM60Q9H2L4 133 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 TTYH1Q9H313 450 aaPredicted RBP11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 CXXC1Q9P0U4 656 aaPredicted RBP11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
CCDC85C-203ENST00000554996 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 TLR3O15455 904 aaKnown RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 PSMD10O75832 226 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 MCM7P33993 719 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 NASPP49321 788 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 SPIRE1Q08AE8 756 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF174Q15697 407 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 FAM47CQ5HY64 1035 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 CELF3Q5SZQ8 465 aaKnown RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 GDF6Q6KF10 455 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 METTL7BQ6UX53 244 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 FOXD4L4Q8WXT5 416 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 DHX38Q92620 1227 aaKnown RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 WNT8BQ93098 351 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 FAM20AQ96MK3 541 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 RIT2Q99578 217 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 VAV3Q9UKW4 847 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 MICAL3Q7RTP6 2002 aa11.81□□□□□ -0.52
CCDC85C-203ENST00000554996 LAD1O00515 517 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 GGPS1O95749 300 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 CCNE2O96020 404 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 F2P00734 622 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 ATP2B1P20020 1258 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 PBX2P40425 430 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 PTGDRQ13258 359 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 NEDD9Q14511 834 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 CALCRLQ16602 461 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF365Q70YC5 407 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 SLC17A8Q8NDX2 589 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 GJA10Q969M2 543 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 USP28Q96RU2 1077 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF577Q9BSK1 485 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 IL23AQ9NPF7 189 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 TBC1D22BQ9NU19 505 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 CHMP5Q9NZZ3 219 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 CLIC4Q9Y696 253 aa11.8□□□□□ -0.52
CCDC85C-203ENST00000554996 HAS3O00219 553 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 BMP15O95972 392 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 OR52Z1P0C646 297 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 PRPHP41219 470 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 SMAD3P84022 425 aaKnown RBP11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF200P98182 395 aaPredicted RBP11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 PPP2R5CQ13362 524 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 PPIGQ13427 754 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 GPNMBQ14956 572 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 IL17AQ16552 155 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 TCTN1Q2MV58 587 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 LRCH2Q5VUJ6 765 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 CYFIP1Q7L576 1253 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 SLFN12Q8IYM2 578 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 PPTC7Q8NI37 304 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 JPH1Q9HDC5 661 aaPredicted RBP11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 MUC3AQ02505 3323 aa11.79□□□□□ -0.52
CCDC85C-203ENST00000554996 LOXHD1Q8IVV2 1947 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 GAS7O60861 476 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 ATG7O95352 703 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 PSEN2P49810 448 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 MFSD10Q14728 455 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 ARL6IP4Q66PJ3 421 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF746Q6NUN9 644 aaPredicted RBP11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 SESTD1Q86VW0 696 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 DHX37Q8IY37 1157 aaKnown RBP11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 TMEM199Q8N511 208 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 UIMC1Q96RL1 719 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 GPR20Q99678 358 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 SDF4Q9BRK5 362 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 C16orf70Q9BSU1 422 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
CCDC85C-203ENST00000554996 HDAC6Q9UBN7 1215 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms