RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PDIA5Q14554 519 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 TTC8Q8TAM2 541 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 FOXO6A8MYZ6 492 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 NPTXRO95502 500 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 SRGNP10124 158 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 MCL1Q07820 350 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 TMED1Q13445 227 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 MTMR3Q13615 1198 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 ITIH4Q14624 930 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 SPTY2D1Q68D10 685 aaPredicted RBP12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 FITM2Q8N6M3 262 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 VAT1LQ9HCJ6 419 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 H7C1W4 665 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 SMAPO00193 183 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 SUPT3HO75486 399 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 ITGA4P13612 1032 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 ATP6V1C1P21283 382 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 CALB2P22676 271 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 PDE6CP51160 858 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 SCARF1Q14162 830 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 P3H1Q32P28 736 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 AGBL2Q5U5Z8 902 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 DTHD1Q6ZMT9 781 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 HAO1Q9UJM8 370 aa12.97□□□□□ -0.33
RBFOX1-208ENST00000547372 CYP27B1O15528 508 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 ASAP2O43150 1006 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 KLRC1P26715 233 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 USP46P62068 366 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 RAPGEF1Q13905 1077 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 Q4G0T1 1027 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 SDCCAG8Q86SQ7 713 aaPredicted RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 HOOK3Q86VS8 718 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 PIGOQ8TEQ8 1089 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 SPIRE2Q8WWL2 714 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 HPS3Q969F9 1004 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 CNNM2Q9H8M5 875 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 AFF2P51816 1311 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 SNX3O60493 162 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 BMP15O95972 392 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 ITGA6P23229 1130 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 ZC2HC1CQ53FD0 456 aaPredicted RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 DENND2CQ68D51 928 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 DNAJC14Q6Y2X3 702 aaPredicted RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 PIGWQ7Z7B1 504 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 ZNF654Q8IZM8 581 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 STAG2Q8N3U4 1231 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 MIPOL1Q8TD10 442 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 UIMC1Q96RL1 719 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 ADAMTS1Q9UHI8 967 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 TSPOAP1O95153 1857 aa12.96□□□□□ -0.33
RBFOX1-208ENST00000547372 RBM12BQ8IXT5 1001 aaKnown RBP12.96□□□□□ -0.34
RBFOX1-208ENST00000547372 ESR2Q92731 530 aa12.96□□□□□ -0.34
RBFOX1-208ENST00000547372 RNPEPL1Q9HAU8 725 aa12.96□□□□□ -0.34
RBFOX1-208ENST00000547372 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.34
RBFOX1-208ENST00000547372 UTP11Q9Y3A2 253 aaKnown RBP12.96□□□□□ -0.34
RBFOX1-208ENST00000547372 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.34
RBFOX1-208ENST00000547372 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 ATP9AO75110 1047 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 SGMS1Q86VZ5 419 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 MARCH10Q8NA82 808 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 ZFAND2BQ8WV99 257 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 RAB3IPQ96QF0 476 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 TTYH3Q9C0H2 523 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 MAF1Q9H063 256 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 CCDC160A6NGH7 325 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 F8VZ95 297 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 CUL1Q13616 776 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 UBE4AQ14139 1066 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 DYMQ7RTS9 669 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 RNF168Q8IYW5 571 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 FMO2Q99518 471 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 VCX3BQ9H321 246 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 THAP9Q9H5L6 903 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 VCX3AQ9NNX9 186 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
RBFOX1-208ENST00000547372 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms