RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CAMSAP1Q5T5Y3 1602 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 IPO5O00410 1097 aaKnown RBP6.99□□□□□ -1.29
LSAMP-207ENST00000539563 NDUFA10O95299 355 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SERPINB6P35237 376 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 RCAN1P53805 252 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 TNFAIP2Q03169 654 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PTPROQ16827 1216 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 C6orf118Q5T5N4 469 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 CIAPIN1Q6FI81 312 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 FAM133AQ8N9E0 248 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 CFAP61Q8NHU2 1237 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SNX1Q13596 522 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SNCBQ16143 134 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SMYD4Q8IYR2 804 aaPredicted RBP6.99□□□□□ -1.29
LSAMP-207ENST00000539563 THEM5Q8N1Q8 247 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 DEPDC1BQ8WUY9 529 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 FAM149B1Q96BN6 582 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 FMO2Q99518 471 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 EFHD1Q9BUP0 239 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.99□□□□□ -1.29
LSAMP-207ENST00000539563 H7C1W4 665 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 MEIS1O00470 390 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 ACTN1P12814 892 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 STMN1P16949 149 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 NR5A1Q13285 461 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 CUL1Q13616 776 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 LRRC41Q15345 812 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 KIAA1841Q6NSI8 718 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 RNF207Q6ZRF8 634 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 UNC13DQ70J99 1090 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 NDUFAF2Q8N183 169 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 CCNYQ8ND76 341 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 NEK9Q8TD19 979 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 ANTXR1Q9H6X2 564 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 GDF11O95390 407 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.29
LSAMP-207ENST00000539563 KLC3Q6P597 504 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 C7orf31Q8N865 590 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 MOCS3O95396 460 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 VSTM4Q8IW00 320 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 FAM167AQ96KS9 214 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PDE11AQ9HCR9 933 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PCDHA6Q9UN73 950 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PCDHA8Q9Y5H6 950 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PALLDQ8WX93 1383 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 ZNF521Q96K83 1311 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 BCORL1Q5H9F3 1711 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SUSD4Q5VX71 490 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 MCPH1Q8NEM0 835 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PDZD8Q8NEN9 1154 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 DHX38Q92620 1227 aaKnown RBP6.99□□□□□ -1.29
LSAMP-207ENST00000539563 DRC3Q9H069 523 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 NDST4Q9H3R1 872 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 HOXC10Q9NYD6 342 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PRKAB2O43741 272 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 ADCY2Q08462 1091 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 C2orf54Q08AI8 447 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 UBE2SQ16763 222 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 CENPUQ71F23 418 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 RYBPQ8N488 228 aaPredicted RBP6.99□□□□□ -1.29
LSAMP-207ENST00000539563 TTLL11Q8NHH1 800 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 PIGBQ92521 554 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 SLC10A4Q96EP9 437 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 KIF9Q9HAQ2 790 aa6.99□□□□□ -1.29
LSAMP-207ENST00000539563 IQANK1A0A1B0GTG1 560 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 UBXN2AP68543 259 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PPARDQ03181 441 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 GLE1Q53GS7 698 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 TTLL6Q8N841 843 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 TTC25Q96NG3 672 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 NXF1Q9UBU9 619 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SEL1LQ9UBV2 794 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CCDC151A5D8V7 595 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SASH1O94885 1247 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 MT-ND3P03897 115 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SRGAP2CP0DJJ0 459 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ATG16L1Q676U5 607 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 C11orf57Q6ZUT1 292 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SIX6OS1Q8N1H7 587 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 FAM20AQ96MK3 541 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 STRBPQ96SI9 672 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 BPIFA3Q9BQP9 254 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ATP8A1Q9Y2Q0 1164 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 RPS6KA4O75676 772 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 RAD17O75943 681 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CLTAP09496 248 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 DDIT3P35638 169 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ERICH1Q86X53 443 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 HEXIM2Q96MH2 286 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CALN1Q9BXU9 219 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CCDC188H7C350 402 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 DNAJC8O75937 253 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 EIF4A3P38919 411 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PFKFB3Q16875 520 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 HSP90AA5PQ58FG0 334 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ATP6V1E2Q96A05 226 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CCDC124Q96CT7 223 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ZNF341Q9BYN7 854 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 UBN1Q9NPG3 1134 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms