RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MYH7BA7E2Y1 1941 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 LRRC53A6NM62 1247 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 PDE2AO00408 941 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-207ENST00000538862 AKR1B10O60218 316 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 PPP1R11O60927 126 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-207ENST00000538862 LMAN1P49257 510 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 COASYQ13057 564 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 ECM1Q16610 540 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 ASTE1Q2TB18 679 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-207ENST00000538862 PDXDC1Q6P996 788 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 RRAGAQ7L523 313 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 CREG2Q8IUH2 290 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 SYN2Q92777 582 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-207ENST00000538862 ALS2CR12Q96Q35 445 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 FAN1Q9Y2M0 1017 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 COL4A3BPQ9Y5P4 624 aa16.05■□□□□ 0.16
CDCA3-207ENST00000538862 ZNF185O15231 689 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 GNA14O95837 355 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 TCP1P17987 556 aaKnown RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 UBE2SQ16763 222 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 CCNI2Q6ZMN8 369 aaPredicted RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 COG1Q8WTW3 980 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 PSTPIP2Q9H939 334 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 FAM155AB1AL88 458 aaPredicted RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 MARCH6O60337 910 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 SHMT1P34896 483 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 ACTN2P35609 894 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 MAGEA1P43355 309 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 MARSP56192 900 aaKnown RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 FKBP1BP68106 108 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 KCNMA1Q12791 1236 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 TNFAIP1Q13829 316 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 LRRC41Q15345 812 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 CACNA2D4Q7Z3S7 1137 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
CDCA3-207ENST00000538862 CEP72Q9P209 647 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 PPP2R3BQ9Y5P8 575 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 CAPN6Q9Y6Q1 641 aa16.04■□□□□ 0.16
CDCA3-207ENST00000538862 MYH10P35580 1976 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 RBAK-RBAKDNI3L0D1 243 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 TTBK2Q6IQ55 1244 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 CDC42EP5Q6NZY7 148 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 DHX37Q8IY37 1157 aaKnown RBP16.03■□□□□ 0.16
CDCA3-207ENST00000538862 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 TEPSINQ96N21 525 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 USP40Q9NVE5 1235 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
CDCA3-207ENST00000538862 HPCAL4Q9UM19 191 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 HYOU1Q9Y4L1 999 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 MYH4Q9Y623 1939 aa16.03■□□□□ 0.16
CDCA3-207ENST00000538862 RPS6KA5O75582 802 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 MOCS3O95396 460 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 HLA-DOAP06340 250 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 USP11P51784 963 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 SMCR8Q8TEV9 937 aaPredicted RBP16.02■□□□□ 0.16
CDCA3-207ENST00000538862 OSBPL9Q96SU4 736 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 TANGO6Q9C0B7 1094 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 MLXIPQ9HAP2 919 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 WBP1LQ9NX94 342 aa16.02■□□□□ 0.16
CDCA3-207ENST00000538862 USP17L10C9JJH3 530 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 SYF2O95926 243 aaKnown RBP16.02■□□□□ 0.15
CDCA3-207ENST00000538862 TNNT3P45378 269 aaPredicted RBP16.02■□□□□ 0.15
CDCA3-207ENST00000538862 NFIAQ12857 509 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 MKRN3Q13064 507 aaKnown RBP16.02■□□□□ 0.15
CDCA3-207ENST00000538862 SLC9C1Q4G0N8 1177 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 CCDC40Q4G0X9 1142 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 HGSNATQ68CP4 663 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 LEKR1Q6ZMV7 388 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 RASAL3Q86YV0 1011 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 GLIS3Q8NEA6 775 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 EHD4Q9H223 541 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.15
CDCA3-207ENST00000538862 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 PCDHA2Q9Y5H9 948 aa16.02■□□□□ 0.15
CDCA3-207ENST00000538862 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 OTOFQ9HC10 1997 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 CYP3A7-CYP3A51PA0A087WV96 503 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 SLC10A3P09131 477 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 CYP3A7P24462 503 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 C2orf54Q08AI8 447 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 TCP10Q12799 353 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 SUPT20HL1Q3ZLR7 823 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 MOXD1Q6UVY6 613 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 ZC3H3Q8IXZ2 948 aaKnown RBP16.01■□□□□ 0.15
CDCA3-207ENST00000538862 MBOAT7Q96N66 472 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 KCNMB3Q9NPA1 279 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms