RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 KCNQ1P51787 676 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 ERVK-21P61565 698 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 GPNMBQ14956 572 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 PTPROQ16827 1216 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 SLC35G1Q2M3R5 365 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 PLEKHG4Q58EX7 1191 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 KRT40Q6A162 431 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 GLG1Q92896 1179 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 WNT8BQ93098 351 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 NRCAMQ92823 1304 aa11.05□□□□□ -0.64
PPFIA1-223ENST00000532793 SLC27A2O14975 620 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 UPP2O95045 317 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 BMP1P13497 986 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 LIFRP42702 1097 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 MTMR1Q13613 665 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 MBTPS1Q14703 1052 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 HEATR3Q7Z4Q2 680 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 CCDC82Q8N4S0 544 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 ESYT1Q9BSJ8 1104 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 C1QTNF1Q9BXJ1 281 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 IFIH1Q9BYX4 1025 aaKnown RBP11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 ADAM33Q9BZ11 813 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 SUGCTQ9HAC7 445 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 ERAP1Q9NZ08 941 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
PPFIA1-223ENST00000532793 M0QZ92 97 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 MEIS2O14770 477 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 MAFGO15525 162 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 RPLP2P05387 115 aaKnown RBP11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 COL9A1P20849 921 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 FGD1P98174 961 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 HIC1Q14526 733 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 RAB11FIP4Q86YS3 637 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 NECAB3Q96P71 396 aaPredicted RBP11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 AZI2Q9H6S1 392 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
PPFIA1-223ENST00000532793 CDH23Q9H251 3354 aa11.02□□□□□ -0.64
PPFIA1-223ENST00000532793 UNC80Q8N2C7 3258 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 LAMA2P24043 3122 aaKnown RBP11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 LPXNO60711 386 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 MARK3P27448 753 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 HOXC8P31273 242 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 NAPAP54920 295 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 SEMA3FQ13275 785 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 UBE2SQ16763 222 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 TCTN1Q2MV58 587 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 SPRED2Q7Z698 418 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 NEK1Q96PY6 1258 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 C17orf80Q9BSJ5 609 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 LRRC2Q9BYS8 371 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 LSG1Q9H089 658 aaKnown RBP11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 BCAS3Q9H6U6 928 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 JPH1Q9HDC5 661 aaPredicted RBP11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 PCDHA6Q9UN73 950 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 PCDHA8Q9Y5H6 950 aa11.02□□□□□ -0.65
PPFIA1-223ENST00000532793 hCG_1642624A0A1W2PR95 340 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 hCG_1984214I3L0E3 225 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 ZNF76P36508 570 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 IGBP1P78318 339 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 HTRA4P83105 476 aaPredicted RBP11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 GRIK4Q16099 956 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 FAM26DQ5JW98 314 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 EP400NLQ6ZTU2 488 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 ZNF713Q8N859 430 aaPredicted RBP11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 TOP1MTQ969P6 601 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 SLC9A2Q9UBY0 812 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 RWDD3Q9Y3V2 267 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 COL4A6Q14031 1691 aa11.01□□□□□ -0.65
PPFIA1-223ENST00000532793 MYH9P35579 1960 aaKnown RBP11□□□□□ -0.65
PPFIA1-223ENST00000532793 RRN3P2A6NIE6 340 aa11□□□□□ -0.65
PPFIA1-223ENST00000532793 ZBTB43O43298 467 aa11□□□□□ -0.65
PPFIA1-223ENST00000532793 ATP9AO75110 1047 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms