RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 PFKMP08237 780 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 SMIM10L2AP0DMW4 78 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 SMIM10L2BP0DMW5 78 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 GNAT1P11488 350 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 DNAJB2P25686 324 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 KRT2P35908 639 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 CCL23P55773 120 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 KRT76Q01546 638 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 INF2Q27J81 1249 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 KRT40Q6A162 431 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 NEK8Q86SG6 692 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 ETNPPLQ8TBG4 499 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 HERVK_113Q902F9 699 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 DHX38Q92620 1227 aaKnown RBP12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 TTYH1Q9H313 450 aaPredicted RBP12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 BRMS1Q9HCU9 246 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 PCDHA10Q9Y5I2 948 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 MAFBQ9Y5Q3 323 aaPredicted RBP12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 UMODL1Q5DID0 1318 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 SCN5AQ14524 2016 aa12.25□□□□□ -0.45
GPATCH4-216ENST00000531900 C17orf102A2RUQ5 167 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 MBLAC1A4D2B0 266 aaPredicted RBP12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 BTBD18B2RXH4 712 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 DLL1O00548 723 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 DTNBO60941 627 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 TDP2O95551 362 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 IQCF3P0C7M6 154 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 STAT5BP51692 787 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 SP4Q02446 784 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 NR5A1Q13285 461 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 RETREG2Q8NC44 543 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 RDM1Q8NG50 284 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 GLG1Q92896 1179 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 FAM20AQ96MK3 541 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 AZI2Q9H6S1 392 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 KCNMB3Q9NPA1 279 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 MSRAQ9UJ68 235 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
GPATCH4-216ENST00000531900 RRN3P2A6NIE6 340 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 CXCL10P02778 98 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 RPLP2P05387 115 aaKnown RBP12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 CKBP12277 381 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 FOSL2P15408 326 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 SELPP16109 830 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 SFNP31947 248 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 CHMP4BP1P59074 171 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 TRIM29Q14134 588 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 GPNMBQ14956 572 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 RAB30Q15771 203 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 MIS18BP1Q6P0N0 1132 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 OTOP2Q7RTS6 562 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 MAFAQ8NHW3 353 aaPredicted RBP12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 PPP1R13LQ8WUF5 828 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 MYLIPQ8WY64 445 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 ATP6V0A1Q93050 837 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 C8orf76Q96K31 380 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 FOXP1Q9H334 677 aaPredicted RBP12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 ZNF576Q9H609 170 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 SETD4Q9NVD3 440 aa12.23□□□□□ -0.45
GPATCH4-216ENST00000531900 EVPLQ92817 2033 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 WDR64B1ANS9 1081 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 TREHO43280 583 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 PSAPP07602 524 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 ORC2Q13416 577 aaPredicted RBP12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 LETM2Q2VYF4 491 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 MARCH8Q5T0T0 291 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 LRCH2Q5VUJ6 765 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 CCDC60Q8IWA6 550 aaPredicted RBP12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 ATP8B4Q8TF62 1192 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 WNT8BQ93098 351 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 SCLYQ96I15 445 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 PBX4Q9BYU1 374 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 DISC1Q9NRI5 854 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 KIF3AQ9Y496 699 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 SLC4A7Q9Y6M7 1214 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 TRANK1O15050 2925 aa12.22□□□□□ -0.45
GPATCH4-216ENST00000531900 COL1A2P08123 1366 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 A0A0C4DFX4 3053 aa12.21□□□□□ -0.45
GPATCH4-216ENST00000531900 MYO9BQ13459 2157 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms