RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ERICH2A1L162 156 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 NCK2O43639 380 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 RXRAP19793 462 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 MARK3P27448 753 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 ARHGAP4P98171 946 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 TRDNQ13061 729 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 RSPO4Q2I0M5 234 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-210ENST00000527699 SERINC5Q86VE9 423 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 IGFLR1Q9H665 355 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 CD207Q9UJ71 328 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 INSL6Q9Y581 213 aa11.44□□□□□ -0.58
CAPN1-210ENST00000527699 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 E7EWF7 191 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 PARNO95453 639 aaKnown RBP11.43□□□□□ -0.58
CAPN1-210ENST00000527699 LTBRP36941 435 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 DLX2Q07687 328 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-210ENST00000527699 GPM6BQ13491 265 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 PLEKHG4Q58EX7 1191 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 TTC22Q5TAA0 569 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 KCNV1Q6PIU1 500 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 RUFY4Q6ZNE9 571 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 RALYLQ86SE5 291 aaKnown RBP11.43□□□□□ -0.58
CAPN1-210ENST00000527699 TICAM2Q86XR7 235 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 SEPT8Q92599 483 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 RIPOR3Q96MK2 946 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 GPR20Q99678 358 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 DLL3Q9NYJ7 618 aa11.43□□□□□ -0.58
CAPN1-210ENST00000527699 DOCK5Q9H7D0 1870 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-210ENST00000527699 PLEKHA8P1O95397 391 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 GHRP10912 638 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 HOXD8P13378 290 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-210ENST00000527699 ANTXR2P58335 489 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 IGBP1P78318 339 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 COL9A3Q14050 684 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-210ENST00000527699 UBE2SQ16763 222 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 ERICH6BQ5W0A0 696 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 TMEM105Q8N8V8 129 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
CAPN1-210ENST00000527699 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
CAPN1-210ENST00000527699 EMSYQ7Z589 1322 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 SPATA31C2B4DYI2 1134 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 EFCAB14O75071 495 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 ATP9AO75110 1047 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 LMNAP02545 664 aaKnown RBP11.41□□□□□ -0.58
CAPN1-210ENST00000527699 CHMLP26374 656 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 CTNNB1P35222 781 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 GHRHRQ02643 423 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 DMWDQ09019 674 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 GNPTABQ3T906 1256 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 KIAA0319Q5VV43 1072 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 CATIPQ7Z7H3 387 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 NCOA7Q8NI08 942 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 CUL5Q93034 780 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 MAF1Q9H063 256 aa11.41□□□□□ -0.58
CAPN1-210ENST00000527699 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-210ENST00000527699 LOC730098B7Z3J9 87 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 FIBPO43427 364 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 CHRNA1P02708 482 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 TGFB3P10600 412 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 GTF2F1P35269 517 aaKnown RBP eCLIP11.4□□□□□ -0.58
CAPN1-210ENST00000527699 NDUFV1P49821 464 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 HTRA4P83105 476 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-210ENST00000527699 TROAPQ12815 778 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 NEDD9Q14511 834 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 IGDCC4Q8TDY8 1250 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 TOP1MTQ969P6 601 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 RRP36Q96EU6 259 aaKnown RBP11.4□□□□□ -0.58
CAPN1-210ENST00000527699 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.58
CAPN1-210ENST00000527699 MAP3K20Q9NYL2 800 aaKnown RBP11.4□□□□□ -0.58
CAPN1-210ENST00000527699 BAZ2BQ9UIF8 2168 aaKnown RBP11.4□□□□□ -0.59
CAPN1-210ENST00000527699 H3BNC9 293 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 TBX10O75333 385 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 ICAM3P32942 547 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 TCF7P36402 384 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 TMEM62Q0P6H9 643 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 COL19A1Q14993 1142 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 SART3Q15020 963 aaKnown RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 PTPN21Q16825 1174 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 METTL7BQ6UX53 244 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 ZNF654Q8IZM8 581 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 SP7Q8TDD2 431 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 DNAJB3Q8WWF6 145 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 PGBD1Q96JS3 809 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 INPP4AQ96PE3 977 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 USP26Q9BXU7 913 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 FAM49AQ9H0Q0 323 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-210ENST00000527699 MFSD1Q9H3U5 465 aa11.39□□□□□ -0.59
CAPN1-210ENST00000527699 LY9Q9HBG7 655 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms