RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 ARHGEF15O94989 841 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 SMIM10L2AP0DMW4 78 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 SMIM10L2BP0DMW5 78 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
CLP1-202ENST00000525602 HOXC8P31273 242 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 CIITAP33076 1130 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
CLP1-202ENST00000525602 TFF2Q03403 129 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 BFSP2Q13515 415 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 PPP2R2DQ66LE6 453 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 CAGE1Q8TC20 777 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 ATXN2LQ8WWM7 1075 aaKnown RBP14.5□□□□□ -0.09
CLP1-202ENST00000525602 WASF1Q92558 559 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 SLC28A3Q9HAS3 691 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 EMSYQ7Z589 1322 aa14.5□□□□□ -0.09
CLP1-202ENST00000525602 TRIP12Q14669 1992 aaPredicted RBP14.5□□□□□ -0.09
CLP1-202ENST00000525602 C17orf102A2RUQ5 167 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 EPOPA6NHQ4 379 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 JAK2O60674 1132 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 XBP1P17861 261 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 ACTR2P61160 394 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 RBL2Q08999 1139 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 PTK7Q13308 1070 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 PRR16Q569H4 304 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 KRT40Q6A162 431 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 DEFB128Q7Z7B8 93 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 CCDC155Q8N6L0 562 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 TBCKQ8TEA7 893 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 LENG9Q96B70 501 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 UHRF1Q96T88 793 aaPredicted RBP14.49□□□□□ -0.09
CLP1-202ENST00000525602 CERS4Q9HA82 394 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
CLP1-202ENST00000525602 GJB4Q9NTQ9 266 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 SLC4A7Q9Y6M7 1214 aa14.49□□□□□ -0.09
CLP1-202ENST00000525602 DDX39AO00148 427 aaKnown RBP14.48□□□□□ -0.09
CLP1-202ENST00000525602 IPO5O00410 1097 aaKnown RBP14.48□□□□□ -0.09
CLP1-202ENST00000525602 DHX15O43143 795 aaKnown RBP14.48□□□□□ -0.09
CLP1-202ENST00000525602 LGR5O75473 907 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 CCNE2O96020 404 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 IQCF3P0C7M6 154 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 USP11P51784 963 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 SPRED2Q7Z698 418 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 CCDC83Q8IWF9 413 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 RETREG2Q8NC44 543 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 AFAP1L1Q8TED9 768 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 WNT8BQ93098 351 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 UIMC1Q96RL1 719 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 PCYT2Q99447 389 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 ZNF577Q9BSK1 485 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 MTIF3Q9H2K0 278 aaKnown RBP14.48□□□□□ -0.09
CLP1-202ENST00000525602 RNPEPQ9H4A4 650 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 SMARCAD1Q9H4L7 1026 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 ERAP1Q9NZ08 941 aa14.48□□□□□ -0.09
CLP1-202ENST00000525602 CA3P07451 260 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 PFKMP08237 780 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 ATP2A2P16615 1042 aaKnown RBP14.47□□□□□ -0.09
CLP1-202ENST00000525602 MARK3P27448 753 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 RFC2P35250 354 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 KCNQ1P51787 676 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 MRPS5P82675 430 aaKnown RBP14.47□□□□□ -0.09
CLP1-202ENST00000525602 NONOQ15233 471 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLP1-202ENST00000525602 RABEP1Q15276 862 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 TRIM71Q2Q1W2 868 aaKnown RBP14.47□□□□□ -0.09
CLP1-202ENST00000525602 LRRC8DQ7L1W4 858 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 KRT25Q7Z3Z0 450 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 SERINC5Q86VE9 423 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 RPUSD2Q8IZ73 545 aaKnown RBP14.47□□□□□ -0.09
CLP1-202ENST00000525602 LMBR1Q8WVP7 490 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 GLG1Q92896 1179 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 ATP6V0A1Q93050 837 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 SETD4Q9NVD3 440 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 TREHO43280 583 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 ATG7O95352 703 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 TDP2O95551 362 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 GNAT1P11488 350 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 CKBP12277 381 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 SELPP16109 830 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 PPFIA1Q13136 1202 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 OXER1Q8TDS5 423 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 ZSCAN31Q96LW9 406 aaPredicted RBP14.47□□□□□ -0.09
CLP1-202ENST00000525602 AZI2Q9H6S1 392 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 SH2B1Q9NRF2 756 aaPredicted RBP14.47□□□□□ -0.09
CLP1-202ENST00000525602 TBC1D22BQ9NU19 505 aa14.47□□□□□ -0.09
CLP1-202ENST00000525602 NRCAMQ92823 1304 aa14.46□□□□□ -0.09
CLP1-202ENST00000525602 CYP3A7-CYP3A51PA0A087WV96 503 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 IGKV6D-21A0A0A0MT36 114 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 CCDC194A0A1B0GVG4 234 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 MSH4O15457 936 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 CYP3A7P24462 503 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 KRT2P35908 639 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 FOSBP53539 338 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 ADAM17P78536 824 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 INF2Q27J81 1249 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 Q4G0T1 1027 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 ZNF746Q6NUN9 644 aaPredicted RBP14.46□□□□□ -0.1
CLP1-202ENST00000525602 TRAF7Q6Q0C0 670 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 MOXD1Q6UVY6 613 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 ABHD15Q6UXT9 468 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 PLPPR4Q7Z2D5 763 aa14.46□□□□□ -0.1
CLP1-202ENST00000525602 MBOAT7Q96N66 472 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms