RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 SYTL5Q8TDW5 730 aaPredicted RBP6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 TBC1D5Q92609 795 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 IWS1Q96ST2 819 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 WDR11Q9BZH6 1224 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 AP5M1Q9H0R1 490 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 CPVLQ9H3G5 476 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 KAT14Q9H8E8 782 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 PRDM5Q9NQX1 630 aaPredicted RBP6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 MTMR7Q9Y216 660 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 TNKSO95271 1327 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 MROH7Q68CQ1 1323 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 NAV1Q8NEY1 1877 aa6.94□□□□□ -1.3
CCDC90B-204ENST00000525504 ARID1BQ8NFD5 2236 aaPredicted RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 A6NJR5 290 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 B4DLN1 442 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 KPNA6O60684 536 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 PTGS1P23219 599 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 CALML3P27482 149 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 MRPL12P52815 198 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 BEX3Q00994 111 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 FPGSQ05932 587 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 ITGA7Q13683 1181 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 CDC37Q16543 378 aaPredicted RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 QRICH1Q2TAL8 776 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 PPP2R2DQ66LE6 453 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 SLC30A10Q6XR72 485 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 STOX1Q6ZVD7 989 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 NOL8Q76FK4 1167 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 Q7L0L9 218 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 EEPD1Q7L9B9 569 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 MCF2L2Q86YR7 1114 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 STAG2Q8N3U4 1231 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 IGDCC4Q8TDY8 1250 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 NSUN6Q8TEA1 469 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 SCFD2Q8WU76 684 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 VTI1AQ96AJ9 217 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 VWCEQ96DN2 955 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 UBAC1Q9BSL1 405 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 RIOX1Q9H6W3 641 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 MAP3K20Q9NYL2 800 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 COL20A1Q9P218 1284 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 MAD2L2Q9UI95 211 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 MRPL11Q9Y3B7 192 aaKnown RBP6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 TAF6LQ9Y6J9 622 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 TTC28Q96AY4 2481 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 ABCB11O95342 1321 aa6.93□□□□□ -1.3
CCDC90B-204ENST00000525504 COL6A3P12111 3177 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 TMEM265A0A087WTH1 108 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 SPATA31C2B4DYI2 1134 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 KLRF2D3W0D1 207 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 OPLAHO14841 1288 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 ZBTB5O15062 677 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 PAX4O43316 350 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 EIF3JO75822 258 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 THBS1P07996 1170 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 SMARCA1P28370 1054 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 HSD17B4P51659 736 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 PURAQ00577 322 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 TRDNQ13061 729 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 GRM4Q14833 912 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 TMEM240Q5SV17 173 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 IFIT1BQ5T764 474 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 VSIG10LQ86VR7 867 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 GUCD1Q96NT3 240 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 TAAR1Q96RJ0 339 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 MPHOSPH6Q99547 160 aaKnown RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 MAP3K14Q99558 947 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 MTG1Q9BT17 334 aaPredicted RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 AMNQ9BXJ7 453 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 ALDH8A1Q9H2A2 487 aaPredicted RBP6.92□□□□□ -1.3
CCDC90B-204ENST00000525504 BAZ2AQ9UIF9 1905 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 E7EWF7 191 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TLR3O15455 904 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 CYTH3O43739 400 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 ARIH2O95376 493 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 SUPT20HL2P0C7V6 817 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TXNP10599 105 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 HOXD8P13378 290 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 CSF2RAP15509 400 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 CPT1AP50416 773 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 ANTXR2P58335 489 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 IRX6P78412 446 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 PTPN11Q06124 597 aaPredicted RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TRAF1Q13077 416 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 PPIGQ13427 754 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 TTLL4Q14679 1199 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 LBRQ14739 615 aaKnown RBP6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 NECTIN1Q15223 517 aa6.91□□□□□ -1.3
CCDC90B-204ENST00000525504 STXBP2Q15833 593 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms