RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 BRDTQ58F21 947 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-222ENST00000520948 GIMAP8Q8ND71 665 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-222ENST00000520948 ASB2Q96Q27 587 aa20.56■□□□□ 0.88
VEGFA-222ENST00000520948 TTC28Q96AY4 2481 aa20.56■□□□□ 0.88
VEGFA-222ENST00000520948 CHD7Q9P2D1 2997 aa20.56■□□□□ 0.88
VEGFA-222ENST00000520948 NFASCO94856 1347 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 H3BQV1 296 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 WNT7AO00755 349 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 PFKMP08237 780 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 HOXD8P13378 290 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-222ENST00000520948 SETQ01105 290 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-222ENST00000520948 ITGB3BPQ13352 177 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-222ENST00000520948 LETM2Q2VYF4 491 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 PRR16Q569H4 304 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 CYFIP1Q7L576 1253 aa20.55■□□□□ 0.88
VEGFA-222ENST00000520948 MUC3AQ02505 3323 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 MSH4O15457 936 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 GCFC2P16383 781 aaKnown RBP20.54■□□□□ 0.88
VEGFA-222ENST00000520948 HSDL1Q3SXM5 330 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 METTL7BQ6UX53 244 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 PPTC7Q8NI37 304 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 AFG1LQ8WV93 481 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 NAP1L4Q99733 375 aaKnown RBP20.54■□□□□ 0.88
VEGFA-222ENST00000520948 CERS4Q9HA82 394 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 MLXIPQ9HAP2 919 aa20.54■□□□□ 0.88
VEGFA-222ENST00000520948 RFXAPO00287 272 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 IPO5O00410 1097 aaKnown RBP20.53■□□□□ 0.88
VEGFA-222ENST00000520948 SLC37A4O43826 429 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 CA3P07451 260 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 TOB1P50616 345 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-222ENST00000520948 MRPS5P82675 430 aaKnown RBP20.53■□□□□ 0.88
VEGFA-222ENST00000520948 BECN1Q14457 450 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 NFRKBQ6P4R8 1299 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 ADAMTS19Q8TE59 1207 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 SLC5A5Q92911 643 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 NOD1Q9Y239 953 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 TELO2Q9Y4R8 837 aa20.53■□□□□ 0.88
VEGFA-222ENST00000520948 TRIP12Q14669 1992 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-222ENST00000520948 CCNT1O60563 726 aaKnown RBP20.52■□□□□ 0.88
VEGFA-222ENST00000520948 KPNA6O60684 536 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 HSP90AA1P07900 732 aaKnown RBP20.52■□□□□ 0.88
VEGFA-222ENST00000520948 MMP3P08254 477 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 IQCF3P0C7M6 154 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 ACTN1P12814 892 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 TRAPPC10P48553 1259 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 GNL2Q13823 731 aaKnown RBP20.52■□□□□ 0.88
VEGFA-222ENST00000520948 MCTP1Q6DN14 999 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 RETREG2Q8NC44 543 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 SPRYD3Q8NCJ5 442 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 ETNPPLQ8TBG4 499 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 SPATA33Q96N06 139 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 ZNF577Q9BSK1 485 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 FTOQ9C0B1 505 aaKnown RBP eCLIP20.52■□□□□ 0.88
VEGFA-222ENST00000520948 KCNMB3Q9NPA1 279 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 TBC1D22BQ9NU19 505 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 PKD2L1Q9P0L9 805 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 DDX25Q9UHL0 483 aaKnown RBP20.52■□□□□ 0.88
VEGFA-222ENST00000520948 MTMR6Q9Y217 621 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 PTPRSQ13332 1948 aa20.52■□□□□ 0.88
VEGFA-222ENST00000520948 STX6O43752 255 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 SORBS3O60504 671 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 ATG7O95352 703 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 PDIA4P13667 645 aaKnown RBP20.51■□□□□ 0.87
VEGFA-222ENST00000520948 RFC2P35250 354 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 HAS1Q92839 578 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 RIT2Q99578 217 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 GPR20Q99678 358 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 TCF20Q9UGU0 1960 aaKnown RBP20.51■□□□□ 0.87
VEGFA-222ENST00000520948 TET1Q8NFU7 2136 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 REV3LO60673 3130 aa20.51■□□□□ 0.87
VEGFA-222ENST00000520948 GSTTP1A0A1W2PQM5 241 aa20.5■□□□□ 0.87
VEGFA-222ENST00000520948 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
VEGFA-222ENST00000520948 TBX3O15119 743 aa20.5■□□□□ 0.87
VEGFA-222ENST00000520948 PSMD10O75832 226 aa20.5■□□□□ 0.87
VEGFA-222ENST00000520948 B3GNT9Q6UX72 402 aa20.5■□□□□ 0.87
VEGFA-222ENST00000520948 SLC9A2Q9UBY0 812 aa20.5■□□□□ 0.87
VEGFA-222ENST00000520948 VPS37CA5D8V6 355 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 EPOPA6NHQ4 379 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 RBAK-RBAKDNI3L0D1 243 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 ARHGEF15O94989 841 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 TFF2Q03403 129 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 PTPN11Q06124 597 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 ORC2Q13416 577 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 BFSP2Q13515 415 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 PTGISQ16647 500 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 DGKDQ16760 1214 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 SEPT1Q8WYJ6 367 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 GJA10Q969M2 543 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 FAM20AQ96MK3 541 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 UIMC1Q96RL1 719 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 SLC9A7Q96T83 725 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 UHRF1Q96T88 793 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 SDF4Q9BRK5 362 aa20.49■□□□□ 0.87
VEGFA-222ENST00000520948 TSPYL2Q9H2G4 693 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 JPH1Q9HDC5 661 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-222ENST00000520948 COL4A4P53420 1690 aaPredicted RBP20.48■□□□□ 0.87
VEGFA-222ENST00000520948 CCNE2O96020 404 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms