RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 CCAR1Q8IX12 1150 aaKnown RBP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 SHISA5Q8N114 240 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 MAGEB6Q8N7X4 407 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 C12orf50Q8NA57 414 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 PHC3Q8NDX5 983 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 KIAA1524Q8TCG1 905 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 PIBF1Q8WXW3 757 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 SYTL4Q96C24 671 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 FAM84BQ96KN1 310 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 MYL10Q9BUA6 226 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 SUGCTQ9HAC7 445 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 KBTBD4Q9NVX7 518 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 CACNA2D2Q9NY47 1150 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 ORC3Q9UBD5 711 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 GGT7Q9UJ14 662 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 PPP1R9AQ9ULJ8 1098 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 CYP8B1Q9UNU6 501 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 MINPP1Q9UNW1 487 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 NIP7Q9Y221 180 aaKnown RBP eCLIP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 PCDHGC5Q9Y5F6 944 aa5.23□□□□□ -1.57
PABPC1-212ENST00000519622 OAS3Q9Y6K5 1087 aaKnown RBP5.23□□□□□ -1.57
PABPC1-212ENST00000519622 KAT6BQ8WYB5 2073 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 ROBO3Q96MS0 1386 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 CYP2D7A0A087X1C5 515 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 MINDY4BA8MYZ0 360 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 ZNF213O14771 459 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 GSC2O15499 205 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 GAS2O43903 313 aaKnown RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 RPS6KA4O75676 772 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 CCDC192P0DO97 292 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 IFNAR1P17181 557 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 LMNB1P20700 586 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 GYG1P46976 350 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 CDK8P49336 464 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 NDUFA8P51970 172 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 RPS26P62854 115 aaKnown RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 DYNLL1P63167 89 aaKnown RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 GRIN1Q05586 938 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 FAM160A1Q05DH4 1040 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 PKN1Q16512 942 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 CCDC152Q4G0S7 254 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 SGO2Q562F6 1265 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 AKNAD1Q5T1N1 836 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 GORABQ5T7V8 394 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 C9orf131Q5VYM1 1079 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 ZSCAN25Q6NSZ9 544 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 SHC4Q6S5L8 630 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 HS2ST1Q7LGA3 356 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 BRAPQ7Z569 592 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 VPS37DQ86XT2 251 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 STK11IPQ8N1F8 1099 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 FSIP1Q8NA03 581 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 C2CD4AQ8NCU7 369 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 SHKBP1Q8TBC3 707 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 ERCC4Q92889 916 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 SMARCC1Q92922 1105 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 PHKBQ93100 1093 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 TRIM44Q96DX7 344 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 TMEM87BQ96K49 555 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 RHOVQ96L33 236 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 TMEM74Q96NL1 305 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 MED15Q96RN5 788 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 MTA3Q9BTC8 594 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 TNMDQ9H2S6 317 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 BSDC1Q9NW68 430 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 ZSWIM5Q9P217 1185 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 NARFQ9UHQ1 456 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 NRBP1Q9UHY1 535 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 TUBE1Q9UJT0 475 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 PCDHA4Q9UN74 947 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 PCDHGB7Q9Y5F8 929 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 CSADQ9Y600 493 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 ACTL7BQ9Y614 415 aa5.22□□□□□ -1.57
PABPC1-212ENST00000519622 MORC2Q9Y6X9 1032 aaPredicted RBP5.22□□□□□ -1.57
PABPC1-212ENST00000519622 TNS1Q9HBL0 1735 aaKnown RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 DCDC2CA8MYV0 355 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 SCAMP3O14828 347 aaKnown RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 PF4P02776 101 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 PFKFB1P16118 471 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 SPINK2P20155 84 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 RAB6AP20340 208 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 PTGS1P23219 599 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 HOXA10P31260 410 aaPredicted RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 RCAN1P53805 252 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 CCZ1BP86790 482 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 CCZ1P86791 482 aaPredicted RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 HDLBPQ00341 1268 aaKnown RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 ID3Q02535 119 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 CEBPZQ03701 1054 aaKnown RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 PPARAQ07869 468 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 LRMPQ12912 555 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 UBE4AQ14139 1066 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 SLC39A14Q15043 492 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 LRRFIP1Q32MZ4 808 aaKnown RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 DPCR1Q3MIW9 517 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 ZNF394Q53GI3 561 aa5.21□□□□□ -1.58
PABPC1-212ENST00000519622 EARS2Q5JPH6 523 aaKnown RBP5.21□□□□□ -1.58
PABPC1-212ENST00000519622 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms