RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
PABPC1-212ENST00000519622 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
PABPC1-212ENST00000519622 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-212ENST00000519622 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
PABPC1-212ENST00000519622 FOXD1Q16676 465 aa14.61□□□□□ -0.07
PABPC1-212ENST00000519622 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.17
PABPC1-212ENST00000519622 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
PABPC1-212ENST00000519622 ADRA2BP18089 450 aa13.74□□□□□ -0.21
PABPC1-212ENST00000519622 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-212ENST00000519622 MSH5O43196 834 aa13.53□□□□□ -0.24
PABPC1-212ENST00000519622 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
PABPC1-212ENST00000519622 MAPK8IP2Q13387 824 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-212ENST00000519622 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
PABPC1-212ENST00000519622 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
PABPC1-212ENST00000519622 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
PABPC1-212ENST00000519622 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
PABPC1-212ENST00000519622 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
PABPC1-212ENST00000519622 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-212ENST00000519622 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
PABPC1-212ENST00000519622 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
PABPC1-212ENST00000519622 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
PABPC1-212ENST00000519622 KCNA4P22459 653 aa11.65□□□□□ -0.54
PABPC1-212ENST00000519622 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
PABPC1-212ENST00000519622 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-212ENST00000519622 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
PABPC1-212ENST00000519622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.42□□□□□ -0.58
PABPC1-212ENST00000519622 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
PABPC1-212ENST00000519622 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
PABPC1-212ENST00000519622 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-212ENST00000519622 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-212ENST00000519622 CAPN15O75808 1086 aa10.98□□□□□ -0.65
PABPC1-212ENST00000519622 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
PABPC1-212ENST00000519622 DSG3P32926 999 aa10.92□□□□□ -0.66
PABPC1-212ENST00000519622 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-212ENST00000519622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
PABPC1-212ENST00000519622 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
PABPC1-212ENST00000519622 MYCNP04198 464 aaPredicted RBP10.8□□□□□ -0.68
PABPC1-212ENST00000519622 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
PABPC1-212ENST00000519622 ABCB7O75027 752 aa10.79□□□□□ -0.68
PABPC1-212ENST00000519622 APLP2Q06481 763 aa10.78□□□□□ -0.68
PABPC1-212ENST00000519622 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-212ENST00000519622 ZBTB22O15209 634 aa10.75□□□□□ -0.69
PABPC1-212ENST00000519622 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
PABPC1-212ENST00000519622 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
PABPC1-212ENST00000519622 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
PABPC1-212ENST00000519622 POLA2Q14181 598 aa10.6□□□□□ -0.71
PABPC1-212ENST00000519622 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
PABPC1-212ENST00000519622 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
PABPC1-212ENST00000519622 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
PABPC1-212ENST00000519622 POTEHQ6S545 545 aa10.28□□□□□ -0.76
PABPC1-212ENST00000519622 ZBTB12Q9Y330 459 aaPredicted RBP10.27□□□□□ -0.77
PABPC1-212ENST00000519622 OSCARQ8IYS5 282 aa10.24□□□□□ -0.77
PABPC1-212ENST00000519622 MKRN4PQ13434 485 aaPredicted RBP10.16□□□□□ -0.78
PABPC1-212ENST00000519622 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
PABPC1-212ENST00000519622 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
PABPC1-212ENST00000519622 FBLN2P98095 1184 aa10.1□□□□□ -0.79
PABPC1-212ENST00000519622 REM2Q8IYK8 340 aaPredicted RBP10.1□□□□□ -0.79
PABPC1-212ENST00000519622 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
PABPC1-212ENST00000519622 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
PABPC1-212ENST00000519622 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
PABPC1-212ENST00000519622 PITPNM1O00562 1244 aa10□□□□□ -0.81
PABPC1-212ENST00000519622 NISCHQ9Y2I1 1504 aa10□□□□□ -0.81
PABPC1-212ENST00000519622 PIP4P2Q8N4L2 257 aa9.94□□□□□ -0.82
PABPC1-212ENST00000519622 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-212ENST00000519622 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
PABPC1-212ENST00000519622 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
PABPC1-212ENST00000519622 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
PABPC1-212ENST00000519622 PABPN1Q86U42 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
PABPC1-212ENST00000519622 SPDYE1Q8NFV5 336 aaPredicted RBP9.81□□□□□ -0.84
PABPC1-212ENST00000519622 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
PABPC1-212ENST00000519622 HAX1O00165 279 aa9.7□□□□□ -0.86
PABPC1-212ENST00000519622 EVX2Q03828 476 aa9.69□□□□□ -0.86
PABPC1-212ENST00000519622 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
PABPC1-212ENST00000519622 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
PABPC1-212ENST00000519622 PRR29P0C7W0 189 aa9.67□□□□□ -0.86
PABPC1-212ENST00000519622 SP7Q8TDD2 431 aaPredicted RBP9.67□□□□□ -0.86
PABPC1-212ENST00000519622 C19orf67A6NJJ6 358 aa9.56□□□□□ -0.88
PABPC1-212ENST00000519622 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-212ENST00000519622 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
PABPC1-212ENST00000519622 STAG3Q9UJ98 1225 aa9.49□□□□□ -0.89
PABPC1-212ENST00000519622 PROM2Q8N271 834 aa9.47□□□□□ -0.89
PABPC1-212ENST00000519622 FKBP8Q14318 412 aa9.46□□□□□ -0.9
PABPC1-212ENST00000519622 GABBR2O75899 941 aa9.41□□□□□ -0.9
PABPC1-212ENST00000519622 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
PABPC1-212ENST00000519622 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-212ENST00000519622 ZRANB1Q9UGI0 708 aa9.3□□□□□ -0.92
PABPC1-212ENST00000519622 ZNF579Q8NAF0 562 aaKnown RBP9.26□□□□□ -0.93
PABPC1-212ENST00000519622 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
PABPC1-212ENST00000519622 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
PABPC1-212ENST00000519622 PHF12Q96QT6 1004 aa9.22□□□□□ -0.93
PABPC1-212ENST00000519622 MIER1Q8N108 512 aa9.21□□□□□ -0.94
PABPC1-212ENST00000519622 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
PABPC1-212ENST00000519622 CLCN6P51797 869 aa9.17□□□□□ -0.94
PABPC1-212ENST00000519622 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
PABPC1-212ENST00000519622 TSPYL2Q9H2G4 693 aaPredicted RBP9.15□□□□□ -0.94
PABPC1-212ENST00000519622 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
PABPC1-212ENST00000519622 RASEFQ8IZ41 740 aa9.12□□□□□ -0.95
PABPC1-212ENST00000519622 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
PABPC1-212ENST00000519622 CCDC61Q9Y6R9 512 aa9.1□□□□□ -0.95
PABPC1-212ENST00000519622 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms