RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 CDH23Q9H251 3354 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 CCDC69A6NI79 296 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 DLL1O00548 723 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 KPNA6O60684 536 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 CCND2P30279 289 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 MCM5P33992 734 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 MRPS9P82933 396 aaKnown RBP11.13□□□□□ -0.63
TTC1-202ENST00000518560 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
TTC1-202ENST00000518560 KCNMA1Q12791 1236 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 SEMA3FQ13275 785 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 NNTQ13423 1086 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 PTGISQ16647 500 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 BMP2KLQ5H9B9 411 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
TTC1-202ENST00000518560 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
TTC1-202ENST00000518560 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 KCTD17Q8N5Z5 321 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 MAF1Q9H063 256 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 PRDM12Q9H4Q4 367 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 HDAC6Q9UBN7 1215 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
TTC1-202ENST00000518560 FRMPD4Q14CM0 1322 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 F2P00734 622 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 VSIG8P0DPA2 414 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 CASTP20810 708 aaKnown RBP11.12□□□□□ -0.63
TTC1-202ENST00000518560 DGKDQ16760 1214 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 UBE2SQ16763 222 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 KIAA0753Q2KHM9 967 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 CELF3Q5SZQ8 465 aaKnown RBP11.12□□□□□ -0.63
TTC1-202ENST00000518560 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 PPTC7Q8NI37 304 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 RRP36Q96EU6 259 aaKnown RBP11.12□□□□□ -0.63
TTC1-202ENST00000518560 SPATA33Q96N06 139 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 PRDM6Q9NQX0 595 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 MICAL3Q7RTP6 2002 aa11.12□□□□□ -0.63
TTC1-202ENST00000518560 HAS3O00219 553 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 MEIS2O14770 477 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 CPA1P15085 419 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 KIF5BP33176 963 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 SP4Q02446 784 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
TTC1-202ENST00000518560 GPNMBQ14956 572 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 SPRED2Q7Z698 418 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
TTC1-202ENST00000518560 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 TMEM87BQ96K49 555 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 FTOQ9C0B1 505 aaKnown RBP eCLIP11.11□□□□□ -0.63
TTC1-202ENST00000518560 MTIF3Q9H2K0 278 aaKnown RBP11.11□□□□□ -0.63
TTC1-202ENST00000518560 MAP3K20Q9NYL2 800 aaKnown RBP11.11□□□□□ -0.63
TTC1-202ENST00000518560 BRPF3Q9ULD4 1205 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
TTC1-202ENST00000518560 CNTNAP5Q8WYK1 1306 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 KAT6AQ92794 2004 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 CDC45O75419 566 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
TTC1-202ENST00000518560 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
TTC1-202ENST00000518560 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
TTC1-202ENST00000518560 LAMC2Q13753 1193 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 ADGRE1Q14246 886 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 RAB30Q15771 203 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 APOA5Q6Q788 366 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 TMTC3Q6ZXV5 915 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
TTC1-202ENST00000518560 C7orf31Q8N865 590 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
TTC1-202ENST00000518560 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 C16orf70Q9BSU1 422 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 MLXIPQ9HAP2 919 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
TTC1-202ENST00000518560 MSRAQ9UJ68 235 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 CHD9Q3L8U1 2897 aa11.1□□□□□ -0.63
TTC1-202ENST00000518560 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 NBNO60934 754 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 ADH1CP00326 375 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 LGALS2P05162 132 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 LIFRP42702 1097 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
TTC1-202ENST00000518560 BFSP2Q13515 415 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 TRIM71Q2Q1W2 868 aaKnown RBP11.09□□□□□ -0.63
TTC1-202ENST00000518560 PPP2R2DQ66LE6 453 aa11.09□□□□□ -0.63
TTC1-202ENST00000518560 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms