RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 PTK7Q13308 1070 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 GPNMBQ14956 572 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 PLCB4Q15147 1175 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 LRCH2Q5VUJ6 765 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 SWSAP1Q6NVH7 229 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 TRAF7Q6Q0C0 670 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 AFAP1L1Q8TED9 768 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 HAS1Q92839 578 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 ATP6V0A1Q93050 837 aa23.9■■□□□ 1.42
MTCL1-204ENST00000517554 KIF28PB7ZC32 967 aa23.89■■□□□ 1.41
MTCL1-204ENST00000517554 GAS7O60861 476 aa23.89■■□□□ 1.41
MTCL1-204ENST00000517554 IQCF3P0C7M6 154 aa23.89■■□□□ 1.41
MTCL1-204ENST00000517554 MARCH8Q5T0T0 291 aa23.89■■□□□ 1.41
MTCL1-204ENST00000517554 POTEDQ86YR6 584 aa23.89■■□□□ 1.41
MTCL1-204ENST00000517554 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.89■■□□□ 1.41
MTCL1-204ENST00000517554 AZI2Q9H6S1 392 aa23.89■■□□□ 1.41
MTCL1-204ENST00000517554 TRIP12Q14669 1992 aaPredicted RBP23.89■■□□□ 1.41
MTCL1-204ENST00000517554 SOX1O00570 391 aaPredicted RBP23.88■■□□□ 1.41
MTCL1-204ENST00000517554 GCFC2P16383 781 aaKnown RBP23.88■■□□□ 1.41
MTCL1-204ENST00000517554 GJB2P29033 226 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 PPIGQ13427 754 aaKnown RBP eCLIP23.88■■□□□ 1.41
MTCL1-204ENST00000517554 CUL4AQ13619 759 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 TMEM240Q5SV17 173 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 SMAP1Q8IYB5 467 aaPredicted RBP23.88■■□□□ 1.41
MTCL1-204ENST00000517554 CAGE1Q8TC20 777 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 ZBTB10Q96DT7 871 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 TEKT3Q9BXF9 490 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 PCDHA10Q9Y5I2 948 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 NRCAMQ92823 1304 aa23.88■■□□□ 1.41
MTCL1-204ENST00000517554 CHMP2AO43633 222 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 CKBP12277 381 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 INSRRP14616 1297 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 FXR1P51114 621 aaKnown RBP eCLIP23.87■■□□□ 1.41
MTCL1-204ENST00000517554 PPFIA1Q13136 1202 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 BFSP2Q13515 415 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 GRIK4Q16099 956 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 MIS18BP1Q6P0N0 1132 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 IL23AQ9NPF7 189 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 ZNF302Q9NR11 478 aa23.87■■□□□ 1.41
MTCL1-204ENST00000517554 MAFBQ9Y5Q3 323 aaPredicted RBP23.87■■□□□ 1.41
MTCL1-204ENST00000517554 BACH1O14867 736 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 SAFBQ15424 915 aaKnown RBP eCLIP23.86■■□□□ 1.41
MTCL1-204ENST00000517554 ZNF365Q70YC5 407 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 TRAPPC12Q8WVT3 735 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 FOXP1Q9H334 677 aaPredicted RBP23.86■■□□□ 1.41
MTCL1-204ENST00000517554 DISC1Q9NRI5 854 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 VAV3Q9UKW4 847 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 WDR64B1ANS9 1081 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 ZNF618Q5T7W0 954 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 RUFY4Q6ZNE9 571 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 GABBR1Q9UBS5 961 aa23.86■■□□□ 1.41
MTCL1-204ENST00000517554 LAMA2P24043 3122 aaKnown RBP23.86■■□□□ 1.41
MTCL1-204ENST00000517554 SCN5AQ14524 2016 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 POTEB3A0JP26 581 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 MBLAC1A4D2B0 266 aaPredicted RBP23.85■■□□□ 1.41
MTCL1-204ENST00000517554 ZNF862O60290 1169 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 PSAPP07602 524 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 MBTPS1Q14703 1052 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 UGCGQ16739 394 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 LRIT3Q3SXY7 679 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 FAM160B1Q5W0V3 765 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 PDXDC2PQ6P474 469 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 POTEBQ6S5H4 581 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 RETREG2Q8NC44 543 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 FAM20AQ96MK3 541 aa23.85■■□□□ 1.41
MTCL1-204ENST00000517554 IGSF9BQ9UPX0 1349 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 TANC1Q9C0D5 1861 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 ZBTB42B2RXF5 422 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 EML1O00423 815 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 GNAT1P11488 350 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 SELPP16109 830 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 U2AF2P26368 475 aaKnown RBP eCLIP23.84■■□□□ 1.41
MTCL1-204ENST00000517554 SLC26A2P50443 739 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 IGBP1P78318 339 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 LRRC8DQ7L1W4 858 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 DEFB128Q7Z7B8 93 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 ATP8B4Q8TF62 1192 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 NAP1L4Q99733 375 aaKnown RBP23.84■■□□□ 1.41
MTCL1-204ENST00000517554 OSBPL7Q9BZF2 842 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 TRPC6Q9Y210 931 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 SAMM50Q9Y512 469 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 SZT2Q5T011 3432 aa23.84■■□□□ 1.41
MTCL1-204ENST00000517554 TBX3O15119 743 aa23.83■■□□□ 1.41
MTCL1-204ENST00000517554 RASIP1Q5U651 963 aa23.83■■□□□ 1.41
MTCL1-204ENST00000517554 NOSTRINQ8IVI9 506 aa23.83■■□□□ 1.41
MTCL1-204ENST00000517554 CCDC155Q8N6L0 562 aa23.83■■□□□ 1.41
MTCL1-204ENST00000517554 SMC3Q9UQE7 1217 aa23.83■■□□□ 1.41
MTCL1-204ENST00000517554 NBNO60934 754 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 ATP2B1P20020 1258 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 SFNP31947 248 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 THPOP40225 353 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 JAK3P52333 1124 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 SPIRE1Q08AE8 756 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 PPP2R5CQ13362 524 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 MIER3Q7Z3K6 550 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 LRCH3Q96II8 777 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 TMEM60Q9H2L4 133 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 TCEAL9Q9UHQ7 104 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 TUBE1Q9UJT0 475 aa23.82■■□□□ 1.4
MTCL1-204ENST00000517554 PSRC1Q6PGN9 363 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms