RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 BADQ92934 168 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 PCYT2Q99447 389 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 UNC45AQ9H3U1 944 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 KCNMB3Q9NPA1 279 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 DISC1Q9NRI5 854 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 TRPC6Q9Y210 931 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 KIF28PB7ZC32 967 aa29.29■■■□□ 2.28
DDR1-279ENST00000515529 MCM7P33993 719 aa29.29■■■□□ 2.28
DDR1-279ENST00000515529 TRAPPC10P48553 1259 aa29.29■■■□□ 2.28
DDR1-279ENST00000515529 PDXDC2PQ6P474 469 aa29.29■■■□□ 2.28
DDR1-279ENST00000515529 CKAP2LQ8IYA6 745 aa29.29■■■□□ 2.28
DDR1-279ENST00000515529 RNPEPQ9H4A4 650 aa29.29■■■□□ 2.28
DDR1-279ENST00000515529 PPFIA1Q13136 1202 aa29.28■■■□□ 2.28
DDR1-279ENST00000515529 BFSP2Q13515 415 aa29.28■■■□□ 2.28
DDR1-279ENST00000515529 CCDC60Q8IWA6 550 aaPredicted RBP29.28■■■□□ 2.28
DDR1-279ENST00000515529 RDM1Q8NG50 284 aa29.28■■■□□ 2.28
DDR1-279ENST00000515529 ATP6V0A1Q93050 837 aa29.28■■■□□ 2.28
DDR1-279ENST00000515529 SETD4Q9NVD3 440 aa29.28■■■□□ 2.28
DDR1-279ENST00000515529 NRCAMQ92823 1304 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 IGKV6D-21A0A0A0MT36 114 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 ORC2Q13416 577 aaPredicted RBP29.27■■■□□ 2.28
DDR1-279ENST00000515529 TTC38Q5R3I4 469 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 TMEM199Q8N511 208 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 RETREG2Q8NC44 543 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 AFAP1L1Q8TED9 768 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 NOC4LQ9BVI4 516 aaKnown RBP29.27■■■□□ 2.28
DDR1-279ENST00000515529 UBE2OQ9C0C9 1292 aaKnown RBP29.27■■■□□ 2.28
DDR1-279ENST00000515529 PCDH10Q9P2E7 1040 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 GABBR1Q9UBS5 961 aa29.27■■■□□ 2.28
DDR1-279ENST00000515529 POTEB3A0JP26 581 aa29.26■■■□□ 2.27
DDR1-279ENST00000515529 VPS37CA5D8V6 355 aaPredicted RBP29.26■■■□□ 2.27
DDR1-279ENST00000515529 CYP2C18P33260 490 aa29.26■■■□□ 2.27
DDR1-279ENST00000515529 ZNF200P98182 395 aaPredicted RBP29.26■■■□□ 2.27
DDR1-279ENST00000515529 FPGSQ05932 587 aa29.26■■■□□ 2.27
DDR1-279ENST00000515529 PLCB4Q15147 1175 aa29.26■■■□□ 2.27
DDR1-279ENST00000515529 POTEBQ6S5H4 581 aa29.26■■■□□ 2.27
DDR1-279ENST00000515529 GDF15Q99988 308 aa29.26■■■□□ 2.27
DDR1-279ENST00000515529 ITGB8P26012 769 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 PTK7Q13308 1070 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 ZNF174Q15697 407 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 GRIK4Q16099 956 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 MFSD5Q6N075 450 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 CAGE1Q8TC20 777 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 HAS1Q92839 578 aa29.25■■■□□ 2.27
DDR1-279ENST00000515529 RRN3P2A6NIE6 340 aa29.24■■■□□ 2.27
DDR1-279ENST00000515529 WNT7AO00755 349 aa29.24■■■□□ 2.27
DDR1-279ENST00000515529 IGBP1P78318 339 aa29.24■■■□□ 2.27
DDR1-279ENST00000515529 PPP2R5CQ13362 524 aa29.24■■■□□ 2.27
DDR1-279ENST00000515529 LMBR1Q8WVP7 490 aa29.24■■■□□ 2.27
DDR1-279ENST00000515529 PITPNM1O00562 1244 aa29.23■■■□□ 2.27
DDR1-279ENST00000515529 CCL23P55773 120 aa29.23■■■□□ 2.27
DDR1-279ENST00000515529 PPIGQ13427 754 aaKnown RBP eCLIP29.23■■■□□ 2.27
DDR1-279ENST00000515529 ATP8B4Q8TF62 1192 aa29.23■■■□□ 2.27
DDR1-279ENST00000515529 FAM167AQ96KS9 214 aa29.23■■■□□ 2.27
DDR1-279ENST00000515529 PCDHA12Q9UN75 941 aa29.23■■■□□ 2.27
DDR1-279ENST00000515529 MAFBQ9Y5Q3 323 aaPredicted RBP29.23■■■□□ 2.27
DDR1-279ENST00000515529 LTBP2Q14767 1821 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 TREHO43280 583 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 HBP1O60381 514 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 INSRRP14616 1297 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 HOXC8P31273 242 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 TXKP42681 527 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 RILPL1Q5EBL4 403 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 NCAPH2Q6IBW4 605 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 SERINC5Q86VE9 423 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 VAV3Q9UKW4 847 aa29.22■■■□□ 2.27
DDR1-279ENST00000515529 COLQQ9Y215 455 aaPredicted RBP29.22■■■□□ 2.27
DDR1-279ENST00000515529 UMODL1Q5DID0 1318 aa29.21■■■□□ 2.27
DDR1-279ENST00000515529 BMP8BP34820 402 aa29.21■■■□□ 2.27
DDR1-279ENST00000515529 HIC1Q14526 733 aa29.21■■■□□ 2.27
DDR1-279ENST00000515529 B3GNT9Q6UX72 402 aa29.21■■■□□ 2.27
DDR1-279ENST00000515529 TRMT1LQ7Z2T5 733 aaKnown RBP29.21■■■□□ 2.27
DDR1-279ENST00000515529 BBXQ8WY36 941 aaPredicted RBP29.21■■■□□ 2.27
DDR1-279ENST00000515529 CTAGE1Q96RT6 745 aa29.21■■■□□ 2.27
DDR1-279ENST00000515529 TTC12Q9H892 705 aaPredicted RBP29.21■■■□□ 2.27
DDR1-279ENST00000515529 TUBE1Q9UJT0 475 aa29.21■■■□□ 2.27
DDR1-279ENST00000515529 IGSF9BQ9UPX0 1349 aa29.2■■■□□ 2.27
DDR1-279ENST00000515529 OR52Z1P0C646 297 aa29.2■■■□□ 2.26
DDR1-279ENST00000515529 NRBP2Q9NSY0 501 aa29.2■■■□□ 2.26
DDR1-279ENST00000515529 DKC1O60832 514 aaKnown RBP eCLIP29.19■■■□□ 2.26
DDR1-279ENST00000515529 CSF2RAP15509 400 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 SYT1P21579 422 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 PRKCEQ02156 737 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 ZNF484Q5JVG2 852 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 BRAPQ7Z569 592 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 DHX38Q92620 1227 aaKnown RBP29.19■■■□□ 2.26
DDR1-279ENST00000515529 MTMR9Q96QG7 549 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 TMEM60Q9H2L4 133 aa29.19■■■□□ 2.26
DDR1-279ENST00000515529 KAT6AQ92794 2004 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 EML1O00423 815 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 SELPP16109 830 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 THPOP40225 353 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 NBR1Q14596 966 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 TMEM266Q2M3C6 531 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 TAF2Q6P1X5 1199 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 RSPH3Q86UC2 560 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 SCLYQ96I15 445 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 WNT8AQ9H1J5 351 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 CEP131Q9UPN4 1083 aa29.18■■■□□ 2.26
DDR1-279ENST00000515529 COL1A2P08123 1366 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms