RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RPLP2P05387 115 aaKnown RBP14.49□□□□□ -0.09
CLCN3-210ENST00000515420 ACTN1P12814 892 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 STAT5BP51692 787 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF200P98182 395 aaPredicted RBP14.49□□□□□ -0.09
CLCN3-210ENST00000515420 TAF2Q6P1X5 1199 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 ABHD15Q6UXT9 468 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 RPAINQ86UA6 219 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 LMBR1Q8WVP7 490 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 MBOAT7Q96N66 472 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 SETD4Q9NVD3 440 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 KCNJ14Q9UNX9 436 aa14.49□□□□□ -0.09
CLCN3-210ENST00000515420 CCDC194A0A1B0GVG4 234 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 MBLAC1A4D2B0 266 aaPredicted RBP14.48□□□□□ -0.09
CLCN3-210ENST00000515420 RRN3P2A6NIE6 340 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 TREHO43280 583 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 BAIAP3O94812 1187 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 CCNE2O96020 404 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 CXCL10P02778 98 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 GCFC2P16383 781 aaKnown RBP14.48□□□□□ -0.09
CLCN3-210ENST00000515420 ST3GAL1Q11201 340 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 PPFIA1Q13136 1202 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 FAM160B1Q5W0V3 765 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 MIS18BP1Q6P0N0 1132 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 TRAF7Q6Q0C0 670 aa14.48□□□□□ -0.09
CLCN3-210ENST00000515420 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
CLCN3-210ENST00000515420 MSH4O15457 936 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 ST18O60284 1047 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
CLCN3-210ENST00000515420 GRIK4Q16099 956 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 INF2Q27J81 1249 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF618Q5T7W0 954 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 PPP4R3AQ6IN85 833 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 DEFB128Q7Z7B8 93 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 NEK8Q86SG6 692 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 SLC5A5Q92911 643 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 WNT8BQ93098 351 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 TUBE1Q9UJT0 475 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 PCDHA10Q9Y5I2 948 aa14.47□□□□□ -0.09
CLCN3-210ENST00000515420 POTEB3A0JP26 581 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 WDR64B1ANS9 1081 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 RSPH10B2B2RC85 870 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 DDX39AO00148 427 aaKnown RBP14.46□□□□□ -0.09
CLCN3-210ENST00000515420 BACH1O14867 736 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 JAK2O60674 1132 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 EFCAB14O75071 495 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 MMP1P03956 469 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 PSAPP07602 524 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 RSPH10BP0C881 870 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 MARK3P27448 753 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 SFNP31947 248 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 KRT2P35908 639 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 THPOP40225 353 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 TRIM29Q14134 588 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 GPNMBQ14956 572 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 PLCB4Q15147 1175 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF697Q5TEC3 545 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 CNKSR3Q6P9H4 555 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 POTEBQ6S5H4 581 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 OTOP2Q7RTS6 562 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 CCDC60Q8IWA6 550 aaPredicted RBP14.46□□□□□ -0.09
CLCN3-210ENST00000515420 DEFB123Q8N688 67 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 RDM1Q8NG50 284 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 TNFRSF25Q93038 417 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 TBC1D32Q96NH3 1257 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 TEKT3Q9BXF9 490 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF302Q9NR11 478 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 CXXC1Q9P0U4 656 aaPredicted RBP14.46□□□□□ -0.09
CLCN3-210ENST00000515420 MAFBQ9Y5Q3 323 aaPredicted RBP14.46□□□□□ -0.09
CLCN3-210ENST00000515420 SLC4A7Q9Y6M7 1214 aa14.46□□□□□ -0.09
CLCN3-210ENST00000515420 GBF1Q92538 1859 aa14.46□□□□□ -0.1
CLCN3-210ENST00000515420 COL1A2P08123 1366 aa14.46□□□□□ -0.1
CLCN3-210ENST00000515420 TBX3O15119 743 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 HBP1O60381 514 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 GAS7O60861 476 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 NBNO60934 754 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 PSMD10O75832 226 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 TDP2O95551 362 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 INSRRP14616 1297 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 JAK3P52333 1124 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 RAB30Q15771 203 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 FAM26DQ5JW98 314 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 LRCH2Q5VUJ6 765 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 PIK3AP1Q6ZUJ8 805 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 RSPH3Q86UC2 560 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 CCDC83Q8IWF9 413 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 ETNPPLQ8TBG4 499 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 PHOSPHO2Q8TCD6 241 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 OXER1Q8TDS5 423 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 ATP8B4Q8TF62 1192 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 SLC9A7Q96T83 725 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 FTOQ9C0B1 505 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLCN3-210ENST00000515420 GJB4Q9NTQ9 266 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 DDX25Q9UHL0 483 aaKnown RBP14.45□□□□□ -0.1
CLCN3-210ENST00000515420 TRPC6Q9Y210 931 aa14.45□□□□□ -0.1
CLCN3-210ENST00000515420 MICAL3Q7RTP6 2002 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 SIP14410 1827 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 ABHD14A-ACY1A0A1B0GW23 586 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 ZBBXA8MT70 800 aa14.44□□□□□ -0.1
CLCN3-210ENST00000515420 DNAJB2P25686 324 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms