RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GTF2F1P35269 517 aaKnown RBP eCLIP16.46■□□□□ 0.23
PHF3-209ENST00000509330 USP14P54578 494 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 ENOX2Q16206 610 aaKnown RBP16.46■□□□□ 0.23
PHF3-209ENST00000509330 TSR1Q2NL82 804 aaKnown RBP16.46■□□□□ 0.23
PHF3-209ENST00000509330 TKFCQ3LXA3 575 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 POLR3CQ9BUI4 534 aaPredicted RBP16.46■□□□□ 0.23
PHF3-209ENST00000509330 NLRC4Q9NPP4 1024 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 COL4A3BPQ9Y5P4 624 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 SEMA3FQ13275 785 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 PPP2R5CQ13362 524 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 MAN2A1Q16706 1144 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 COBLL1Q53SF7 1204 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
PHF3-209ENST00000509330 WDR59Q6PJI9 974 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 MCF2L2Q86YR7 1114 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 KCTD10Q9H3F6 313 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 TRIM14Q14142 442 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 PGM5Q15124 567 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 ARHGAP29Q52LW3 1261 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
PHF3-209ENST00000509330 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
PHF3-209ENST00000509330 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
PHF3-209ENST00000509330 HOXD13P35453 343 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
PHF3-209ENST00000509330 NCBP1Q09161 790 aaKnown RBP16.45■□□□□ 0.22
PHF3-209ENST00000509330 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 TELO2Q9Y4R8 837 aa16.45■□□□□ 0.22
PHF3-209ENST00000509330 CASQ1P31415 396 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 CYP27A1Q02318 531 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 TMEM132BQ14DG7 1078 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 DCAF17Q5H9S7 520 aaPredicted RBP16.44■□□□□ 0.22
PHF3-209ENST00000509330 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 COG2Q14746 738 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 ZNF569Q5MCW4 686 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 ZSWIM4Q9H7M6 989 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 TCEAL9Q9UHQ7 104 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 GUCA1BQ9UMX6 200 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
PHF3-209ENST00000509330 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 FAM170AA1A519 330 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 FRMD3A2A2Y4 597 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 FGFR1OPO95684 399 aaKnown RBP16.44■□□□□ 0.22
PHF3-209ENST00000509330 CASP4P49662 377 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 VGLL4Q14135 290 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 ELF2Q15723 593 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 RRAGAQ7L523 313 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
PHF3-209ENST00000509330 TTYH3Q9C0H2 523 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 TMOD4Q9NZQ9 345 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
PHF3-209ENST00000509330 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 ARID5AQ03989 594 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 TREML2Q5T2D2 321 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 KRT26Q7Z3Y9 468 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 AGO4Q9HCK5 861 aaKnown RBP16.43■□□□□ 0.22
PHF3-209ENST00000509330 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 ZNF112Q9UJU3 913 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.43■□□□□ 0.22
PHF3-209ENST00000509330 EPN1Q9Y6I3 576 aaPredicted RBP16.43■□□□□ 0.22
PHF3-209ENST00000509330 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
PHF3-209ENST00000509330 NDUFA10O95299 355 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 UGCGQ16739 394 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
PHF3-209ENST00000509330 C1orf186Q6ZWK4 172 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 PXMP2Q9NR77 195 aa16.43■□□□□ 0.22
PHF3-209ENST00000509330 REXO2Q9Y3B8 237 aaKnown RBP16.43■□□□□ 0.22
PHF3-209ENST00000509330 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 CTIFO43310 598 aaKnown RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 SLU7O95391 586 aaKnown RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 YBX3P16989 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
PHF3-209ENST00000509330 EPHA7Q15375 998 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 ODR4Q5SWX8 454 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 LRRC53A6NM62 1247 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 TTLL12Q14166 644 aaPredicted RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 CACNA2D4Q7Z3S7 1137 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 NACC1Q96RE7 527 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 CARD6Q9BX69 1037 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 ZNHIT6Q9NWK9 470 aaKnown RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 ZNF214Q9UL59 606 aaPredicted RBP16.42■□□□□ 0.22
PHF3-209ENST00000509330 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
PHF3-209ENST00000509330 CETN3O15182 167 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 DSG3P32926 999 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 ERCC6LQ2NKX8 1250 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 PCNX4Q63HM2 1172 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 RDH13Q8NBN7 331 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 CCDC43Q96MW1 224 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms