RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 ZNF286BP0CG31 522 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 PTGS1P23219 599 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 TECP42680 631 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 TOB1P50616 345 aaPredicted RBP14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 EPHA7Q15375 998 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 SF3A1Q15459 793 aaKnown RBP14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 NCAPH2Q6IBW4 605 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 OTUD6AQ7L8S5 288 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 UBE2Q1Q7Z7E8 422 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 NEK9Q8TD19 979 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 AFAP1L1Q8TED9 768 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 GABBR1Q9UBS5 961 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 TRPC6Q9Y210 931 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 EMSYQ7Z589 1322 aa14.32□□□□□ -0.12
TMEM39B-209ENST00000498613 A0A0C4DFX4 3053 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 HBP1O60381 514 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 CCNE2O96020 404 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 PSMC5P62195 406 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 PSMC6P62333 389 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 RESTQ13127 1097 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 FOXD4L5Q5VV16 416 aaPredicted RBP14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 FOXD4L4Q8WXT5 416 aaPredicted RBP14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 BBXQ8WY36 941 aaPredicted RBP14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
TMEM39B-209ENST00000498613 IGKV6D-21A0A0A0MT36 114 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 C17orf102A2RUQ5 167 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 PQBP1O60828 265 aaKnown RBP14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 RPLP2P05387 115 aaKnown RBP14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 CDK7P50613 346 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 RTP1P59025 263 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 TLE2Q04725 743 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 STK38Q15208 465 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 ZNF484Q5JVG2 852 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 KRT79Q5XKE5 535 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 HAUS3Q68CZ6 603 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 KAT2BQ92831 832 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 GJA10Q969M2 543 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 ZSWIM4Q9H7M6 989 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 TMEM39AQ9NV64 488 aa14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 MAFBQ9Y5Q3 323 aaPredicted RBP14.3□□□□□ -0.12
TMEM39B-209ENST00000498613 HAS3O00219 553 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 MARK3P27448 753 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 ATP2C1P98194 919 aaPredicted RBP14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 CEBPZQ03701 1054 aaKnown RBP14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 PPFIA1Q13136 1202 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 NBR1Q14596 966 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 SNX17Q15036 470 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 PTGISQ16647 500 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 LRRC26Q2I0M4 334 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 XKR3Q5GH77 459 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 RSPH3Q86UC2 560 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 TPH2Q8IWU9 490 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 SLC43A3Q8NBI5 491 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 RETREG2Q8NC44 543 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 ATP8B4Q8TF62 1192 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 AK8Q96MA6 479 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 TMEM60Q9H2L4 133 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 HDAC6Q9UBN7 1215 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 VAV3Q9UKW4 847 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 LAMA3Q16787 3333 aa14.29□□□□□ -0.12
TMEM39B-209ENST00000498613 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 BRD1O95696 1058 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 CLTBP09497 229 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 SMIM10L2AP0DMW4 78 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 SMIM10L2BP0DMW5 78 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 XRCC6P12956 609 aaKnown RBP eCLIP14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 MUTP22033 750 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 UBA7P41226 1012 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 BFSP2Q13515 415 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 KCTD17Q8N5Z5 321 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 C4orf32Q8N8J7 132 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 LBHD1Q9BQE6 289 aaPredicted RBP14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 TUFT1Q9NNX1 390 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 GTF2IRD1Q9UHL9 959 aa14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
TMEM39B-209ENST00000498613 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
TMEM39B-209ENST00000498613 MAGEB2O15479 319 aa14.27□□□□□ -0.13
TMEM39B-209ENST00000498613 INSRRP14616 1297 aa14.27□□□□□ -0.13
TMEM39B-209ENST00000498613 NCLP19338 710 aaKnown RBP14.27□□□□□ -0.13
TMEM39B-209ENST00000498613 TMOD1P28289 359 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms