RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 ALS2CR12Q96Q35 445 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
UBXN11-216ENST00000496466 VIPAS39Q9H9C1 493 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.46■□□□□ 0.23
UBXN11-216ENST00000496466 MYH10P35580 1976 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 KRT18P05783 430 aaKnown RBP16.46■□□□□ 0.23
UBXN11-216ENST00000496466 RASSF7Q02833 373 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 Q4G0T1 1027 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 SFMBT2Q5VUG0 894 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 HAUS3Q68CZ6 603 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 MMGT1Q8N4V1 131 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 ACBD3Q9H3P7 528 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 FAN1Q9Y2M0 1017 aa16.46■□□□□ 0.23
UBXN11-216ENST00000496466 PSME4Q14997 1843 aa16.46■□□□□ 0.22
UBXN11-216ENST00000496466 ZMYND10O75800 440 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 SERPING1P05155 500 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 POLR2FP61218 127 aaKnown RBP16.45■□□□□ 0.22
UBXN11-216ENST00000496466 ADAM9Q13443 819 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 TDRD12Q587J7 1177 aaKnown RBP16.45■□□□□ 0.22
UBXN11-216ENST00000496466 CCNI2Q6ZMN8 369 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-216ENST00000496466 ANKRD13CQ8N6S4 541 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 IPO4Q8TEX9 1081 aaKnown RBP16.45■□□□□ 0.22
UBXN11-216ENST00000496466 CCDC102AQ96A19 550 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 OSBPL9Q96SU4 736 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 CRACR2AQ9BSW2 395 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 TMEM39BQ9GZU3 492 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 ZHX3Q9H4I2 956 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 TBX3O15119 743 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 MMP14P50281 582 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 PSMC6P62333 389 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 APBA1Q02410 837 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 MCTP2Q6DN12 878 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 FAM71BQ8TC56 605 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 LENG9Q96B70 501 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 ARHGEF10LQ9HCE6 1279 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 CALCOCO1Q9P1Z2 691 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 HYOU1Q9Y4L1 999 aa16.45■□□□□ 0.22
UBXN11-216ENST00000496466 FAM86B1E9PN63 330 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 FAM86B2P0C5J1 330 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
UBXN11-216ENST00000496466 TNNT3P45378 269 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-216ENST00000496466 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
UBXN11-216ENST00000496466 ITIH3Q06033 890 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 GIT2Q14161 759 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 EDRF1Q3B7T1 1238 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 ATAD5Q96QE3 1844 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 MEIS1O00470 390 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 CETN3O15182 167 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 MYBL2P10244 700 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 RPA1P27694 616 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 SREBF1P36956 1147 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 CASP5P51878 434 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 STAT2P52630 851 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 SLC20A2Q08357 652 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 HSP90B2PQ58FF3 399 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 RNF10Q8N5U6 811 aaKnown RBP16.44■□□□□ 0.22
UBXN11-216ENST00000496466 SYT2Q8N9I0 419 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-216ENST00000496466 ERMNQ8TAM6 284 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 ZNRF3Q9ULT6 936 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 HPCAL4Q9UM19 191 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
UBXN11-216ENST00000496466 NCK2O43639 380 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 LMAN1P49257 510 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 AARSP49588 968 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBXN11-216ENST00000496466 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBXN11-216ENST00000496466 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
UBXN11-216ENST00000496466 KLHDC7AQ5VTJ3 777 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 SPATA4Q8NEY3 305 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 NOX5Q96PH1 765 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 MED4Q9NPJ6 270 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
UBXN11-216ENST00000496466 BUB1O43683 1085 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 FOSP01100 380 aaPredicted RBP16.42■□□□□ 0.22
UBXN11-216ENST00000496466 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 GSPT2Q8IYD1 628 aaKnown RBP16.42■□□□□ 0.22
UBXN11-216ENST00000496466 CYP2W1Q8TAV3 490 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 FAM20AQ96MK3 541 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 GANQ9H2C0 597 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 SCAF8Q9UPN6 1271 aaKnown RBP16.42■□□□□ 0.22
UBXN11-216ENST00000496466 NR2F2P24468 414 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 CXCR5P32302 372 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 CCDC70Q6NSX1 233 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
UBXN11-216ENST00000496466 EPM2AIP1Q7L775 607 aaPredicted RBP16.42■□□□□ 0.22
UBXN11-216ENST00000496466 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms