RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SRRDQ9UH36 339 aa6.57□□□□□ -1.36
SMC4-218ENST00000486711 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
SMC4-218ENST00000486711 TRAV20A0A0B4J274 112 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 CCDC163A0A0D9SF12 145 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 AKAP8O43823 692 aaKnown RBP6.56□□□□□ -1.36
SMC4-218ENST00000486711 FBXO21O94952 628 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 HMGB1P09429 215 aaKnown RBP6.56□□□□□ -1.36
SMC4-218ENST00000486711 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 GPR85P60893 370 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 SQSTM1Q13501 440 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 TCEA2Q15560 299 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 RNF187Q5TA31 235 aaPredicted RBP6.56□□□□□ -1.36
SMC4-218ENST00000486711 KCNT2Q6UVM3 1135 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 C16orf86Q6ZW13 317 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 RALYLQ86SE5 291 aaKnown RBP6.56□□□□□ -1.36
SMC4-218ENST00000486711 IFNL3Q8IZI9 196 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 SYNPOQ8N3V7 929 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 NUDT10Q8NFP7 164 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 DNERQ8NFT8 737 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMC4-218ENST00000486711 SH3RF3Q8TEJ3 882 aaPredicted RBP6.56□□□□□ -1.36
SMC4-218ENST00000486711 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 CD248Q9HCU0 757 aa6.56□□□□□ -1.36
SMC4-218ENST00000486711 KLHL18O94889 574 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 ENO2P09104 434 aaPredicted RBP6.55□□□□□ -1.36
SMC4-218ENST00000486711 PABPC1P11940 636 aaKnown RBP6.55□□□□□ -1.36
SMC4-218ENST00000486711 COL6A2P12110 1019 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 CDSNQ15517 529 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 NTRK3Q16288 839 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 SKIDA1Q1XH10 827 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
SMC4-218ENST00000486711 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 NSMFQ6X4W1 530 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 ZNF662Q6ZS27 426 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 Q6ZUG5 572 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.55□□□□□ -1.36
SMC4-218ENST00000486711 OSBP2Q969R2 916 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 PUS7Q96PZ0 661 aaKnown RBP6.55□□□□□ -1.36
SMC4-218ENST00000486711 KCNJ15Q99712 375 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 DEF6Q9H4E7 631 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 ZFP69BQ9UJL9 534 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 DSEQ9UL01 958 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 TCAF1Q9Y4C2 921 aa6.55□□□□□ -1.36
SMC4-218ENST00000486711 FAM47E-STBD1D6RA91 191 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 PPP1R12AO14974 1030 aaPredicted RBP6.54□□□□□ -1.36
SMC4-218ENST00000486711 KNG1P01042 644 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 LTFP02788 710 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 CKMP06732 381 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 SELENOPP49908 381 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 PHF19Q5T6S3 580 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 CD276Q5ZPR3 534 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 RBM12BQ8IXT5 1001 aaKnown RBP6.54□□□□□ -1.36
SMC4-218ENST00000486711 FEZ1Q99689 392 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 MEGF9Q9H1U4 602 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 ARHGAP20Q9P2F6 1191 aa6.54□□□□□ -1.36
SMC4-218ENST00000486711 PATE3B3GLJ2 98 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 NKRFO15226 690 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC4-218ENST00000486711 ADCY3O60266 1144 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 ASMTLO95671 621 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 FSHBP01225 129 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 SOD2P04179 222 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 C6P13671 934 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 TACR2P21452 398 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 EPHA5P54756 1037 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 ZNF585AQ6P3V2 769 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 KCTD1Q719H9 257 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 SPRED1Q7Z699 444 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 REXO1L1PQ8IX06 675 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 IFNL2Q8IZJ0 200 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 AJUBAQ96IF1 538 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 ALG1Q9BT22 464 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 TMX1Q9H3N1 280 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 SEMA4AQ9H3S1 761 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 SEC61A2Q9H9S3 476 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
SMC4-218ENST00000486711 TRBV23-1A0A0A0MS06 115 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 ZNF839A8K0R7 811 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 CNOT4O95628 575 aaKnown RBP6.52□□□□□ -1.37
SMC4-218ENST00000486711 GLRBP48167 497 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 PFKPQ01813 784 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 YOD1Q5VVQ6 348 aaPredicted RBP6.52□□□□□ -1.37
SMC4-218ENST00000486711 KIAA0907Q7Z7F0 614 aaPredicted RBP6.52□□□□□ -1.37
SMC4-218ENST00000486711 SCUBE1Q8IWY4 988 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 STPG3Q8N7X2 389 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 PTPN18Q99952 460 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 DHRS4Q9BTZ2 278 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 TELO2Q9Y4R8 837 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 SLC4A7Q9Y6M7 1214 aa6.52□□□□□ -1.37
SMC4-218ENST00000486711 H0Y858 1186 aa6.51□□□□□ -1.37
SMC4-218ENST00000486711 MUSKO15146 869 aa6.51□□□□□ -1.37
SMC4-218ENST00000486711 ZNF623O75123 536 aa6.51□□□□□ -1.37
SMC4-218ENST00000486711 HSP90B1P14625 803 aaKnown RBP6.51□□□□□ -1.37
SMC4-218ENST00000486711 CSF2RBP32927 897 aa6.51□□□□□ -1.37
SMC4-218ENST00000486711 PALM2Q8IXS6 379 aa6.51□□□□□ -1.37
SMC4-218ENST00000486711 IPPKQ9H8X2 491 aa6.51□□□□□ -1.37
SMC4-218ENST00000486711 BLACEA4D250 179 aa6.5□□□□□ -1.37
SMC4-218ENST00000486711 GDF5P43026 501 aa6.5□□□□□ -1.37
SMC4-218ENST00000486711 GYS2P54840 703 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms