RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 LAIR1Q6GTX8 287 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 PSAPL1Q6NUJ1 521 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 TMC5Q6UXY8 1006 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 CCDC149Q6ZUS6 474 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 RTN4RL1Q86UN2 441 aaPredicted RBP11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 NPAS4Q8IUM7 802 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 COLGALT1Q8NBJ5 622 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 STAG1Q8WVM7 1258 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
EXOSC1-210ENST00000485122 PNMA6EA0A0J9YXQ4 647 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 TCRBV5S4A2TA0A5A2 114 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 CLASP2O75122 1294 aaKnown RBP11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 MBD4O95243 580 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 ICAM1P05362 532 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 SRFP11831 508 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 RPS6P62753 249 aaKnown RBP11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 MTX1Q13505 466 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 CSRP2Q16527 193 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 FAM26DQ5JW98 314 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 DCLRE1AQ6PJP8 1040 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 OTOP3Q7RTS5 596 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 BORCS6Q96GS4 357 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 EHMT1Q9H9B1 1298 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 MTF2Q9Y483 593 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
EXOSC1-210ENST00000485122 DOCK8Q8NF50 2099 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 GIPC1O14908 333 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 PRB1P04280 392 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 RETP07949 1114 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 EPCAMP16422 314 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 RUFY4Q6ZNE9 571 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 RNF207Q6ZRF8 634 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 SLC44A3Q8N4M1 653 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 PPTC7Q8NI37 304 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 CHURC1Q8WUH1 139 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 SSH1Q8WYL5 1049 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 C16orf70Q9BSU1 422 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 CACNA2D2Q9NY47 1150 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 IGSF9Q9P2J2 1179 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 MYH15Q9Y2K3 1946 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 LAMA4Q16363 1823 aa11.85□□□□□ -0.51
EXOSC1-210ENST00000485122 EIF4E1BA6NMX2 242 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 LRP3O75074 770 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 MCCP23508 829 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 CA8P35219 290 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 PBX3P40426 434 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 SLC1A4P43007 532 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 MGAT3Q09327 533 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 COL28A1Q2UY09 1125 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 HSDL1Q3SXM5 330 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 AASDHQ4L235 1098 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 AMOTL1Q8IY63 956 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 MKL1Q969V6 931 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 AGO3Q9H9G7 860 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 ATP8A2Q9NTI2 1148 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 DDX41Q9UJV9 622 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-210ENST00000485122 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 CHGBP05060 677 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 CD52P31358 61 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 SF3A2Q15428 464 aaKnown RBP11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 TMC7Q7Z402 723 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 GPR20Q99678 358 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 SCNM1Q9BWG6 230 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 MTMR4Q9NYA4 1195 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 MTMR7Q9Y216 660 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 GPSM3Q9Y4H4 160 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 BPTFQ12830 3046 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 ZBED9Q6R2W3 1325 aa11.83□□□□□ -0.52
EXOSC1-210ENST00000485122 MYH7P12883 1935 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 C2orf71A6NGG8 1288 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 PRDM1O75626 825 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 TTLL1O95922 423 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 SCG2P13521 617 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 LIMK1P53667 647 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 STARD6P59095 220 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 ZNF252P-AS1Q0IIN9 211 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 UBXN2BQ14CS0 331 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
EXOSC1-210ENST00000485122 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms