RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 GNAT1P11488 350 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 ATP2B1P20020 1258 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 ITGB8P26012 769 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 CYP2C18P33260 490 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 STAT5BP51692 787 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 ZNF200P98182 395 aaPredicted RBP9.91□□□□□ -0.82
SNX4-205ENST00000482965 FPGSQ05932 587 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 ABHD15Q6UXT9 468 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 HSCBQ8IWL3 235 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 SMAP1Q8IYB5 467 aaPredicted RBP9.91□□□□□ -0.82
SNX4-205ENST00000482965 CCDC155Q8N6L0 562 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 ETNPPLQ8TBG4 499 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 GJA10Q969M2 543 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 PCYT2Q99447 389 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 NOC4LQ9BVI4 516 aaKnown RBP9.91□□□□□ -0.82
SNX4-205ENST00000482965 RNPEPQ9H4A4 650 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 ZNF302Q9NR11 478 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 PCDHA10Q9Y5I2 948 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 TANC1Q9C0D5 1861 aa9.91□□□□□ -0.82
SNX4-205ENST00000482965 EVPLQ92817 2033 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 UMODL1Q5DID0 1318 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 IGKV6D-21A0A0A0MT36 114 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 KIF28PB7ZC32 967 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 TBX3O15119 743 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 PSMD10O75832 226 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
SNX4-205ENST00000482965 SFNP31947 248 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 BMP8BP34820 402 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 JAK3P52333 1124 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 CCL23P55773 120 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 PPFIA1Q13136 1202 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 PTK7Q13308 1070 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 PPIGQ13427 754 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNX4-205ENST00000482965 BFSP2Q13515 415 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 LARP1BQ659C4 914 aaKnown RBP9.9□□□□□ -0.82
SNX4-205ENST00000482965 MCTP1Q6DN14 999 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 MFSD5Q6N075 450 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 SWSAP1Q6NVH7 229 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 PLPPR4Q7Z2D5 763 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 MIER3Q7Z3K6 550 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 CCDC60Q8IWA6 550 aaPredicted RBP9.9□□□□□ -0.82
SNX4-205ENST00000482965 CKAP2LQ8IYA6 745 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 TMEM199Q8N511 208 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 RETREG2Q8NC44 543 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 CAGE1Q8TC20 777 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 TNPO1Q92973 898 aaKnown RBP9.9□□□□□ -0.82
SNX4-205ENST00000482965 ATP6V0A1Q93050 837 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 SNX21Q969T3 373 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 FAM20AQ96MK3 541 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 UNC45AQ9H3U1 944 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 KCNMB3Q9NPA1 279 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 DISC1Q9NRI5 854 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 SETD4Q9NVD3 440 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 NOL7Q9UMY1 257 aaKnown RBP9.9□□□□□ -0.82
SNX4-205ENST00000482965 TRPC6Q9Y210 931 aa9.9□□□□□ -0.82
SNX4-205ENST00000482965 NRCAMQ92823 1304 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 TREHO43280 583 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 NEMFO60524 1076 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 U2AF2P26368 475 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNX4-205ENST00000482965 HOXC8P31273 242 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 MCM7P33993 719 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 SLC26A2P50443 739 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 IGBP1P78318 339 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 HIC1Q14526 733 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 PLCB4Q15147 1175 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 GRIK4Q16099 956 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 CALCRLQ16602 461 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 TTC38Q5R3I4 469 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 SLFN12Q8IYM2 578 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 RDM1Q8NG50 284 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 AFAP1L1Q8TED9 768 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 DHX38Q92620 1227 aaKnown RBP9.89□□□□□ -0.83
SNX4-205ENST00000482965 CTAGE1Q96RT6 745 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 WNT8AQ9H1J5 351 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 PRO3102Q9H379 93 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 GABBR1Q9UBS5 961 aa9.89□□□□□ -0.83
SNX4-205ENST00000482965 DNAH12Q6ZR08 3092 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 TET1Q8NFU7 2136 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 RRN3P2A6NIE6 340 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 WNT7AO00755 349 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 HBP1O60381 514 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 INSRRP14616 1297 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 CSF2RAP15509 400 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 PDCP20941 246 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 TRAPPC10P48553 1259 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 ZNF174Q15697 407 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 POTEHQ6S545 545 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 TRMT1LQ7Z2T5 733 aaKnown RBP9.88□□□□□ -0.83
SNX4-205ENST00000482965 SERINC5Q86VE9 423 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 TDHQ8IZJ6 230 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 HAS1Q92839 578 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 INTS4Q96HW7 963 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms