RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 APBB2Q92870 758 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 CUL5Q93034 780 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 TOP1MTQ969P6 601 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 PABPC5Q96DU9 382 aaKnown RBP11.9□□□□□ -0.5
DDX39B-220ENST00000482195 USP26Q9BXU7 913 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 OSBPL7Q9BZF2 842 aa11.9□□□□□ -0.5
DDX39B-220ENST00000482195 PNMA6FA0A0J9YX94 578 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-220ENST00000482195 FIBPO43427 364 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 DCXO43602 365 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 GHRP10912 638 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 HOXC8P31273 242 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 NUCB1Q02818 461 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 WTAPQ15007 396 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 SART3Q15020 963 aaKnown RBP11.89□□□□□ -0.51
DDX39B-220ENST00000482195 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
DDX39B-220ENST00000482195 TYW1BQ6NUM6 668 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 ALYREFQ86V81 257 aaKnown RBP11.89□□□□□ -0.51
DDX39B-220ENST00000482195 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 LMBR1Q8WVP7 490 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 GPR20Q99678 358 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 IL25Q9H293 177 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 OSBPL3Q9H4L5 887 aa11.89□□□□□ -0.51
DDX39B-220ENST00000482195 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
DDX39B-220ENST00000482195 ADGRA3Q8IWK6 1321 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 TTC3P53804 2025 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 STAM2O75886 525 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 IBSPP21815 317 aaPredicted RBP11.88□□□□□ -0.51
DDX39B-220ENST00000482195 MARK3P27448 753 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
DDX39B-220ENST00000482195 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 RUFY4Q6ZNE9 571 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 INPP4AQ96PE3 977 aaPredicted RBP11.88□□□□□ -0.51
DDX39B-220ENST00000482195 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
DDX39B-220ENST00000482195 IGFLR1Q9H665 355 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 SENP2Q9HC62 589 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
DDX39B-220ENST00000482195 FRMPD4Q14CM0 1322 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 CYTH3O43739 400 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 IGHDP01880 384 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 ICAM3P32942 547 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 ZP2Q05996 745 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 PPFIA1Q13136 1202 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 USP17L6PQ6QN14 398 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 RSPH3Q86UC2 560 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 NLRX1Q86UT6 975 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 SEC63Q9UGP8 760 aaKnown RBP11.87□□□□□ -0.51
DDX39B-220ENST00000482195 RWDD3Q9Y3V2 267 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
DDX39B-220ENST00000482195 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 ZNF318Q5VUA4 2279 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 SPATA31C2B4DYI2 1134 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 GRM6O15303 877 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 TCF7P36402 384 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-220ENST00000482195 IGBP1P78318 339 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 AAMPQ13685 434 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 BTG3Q14201 252 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-220ENST00000482195 GRIK4Q16099 956 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 PCNX4Q63HM2 1172 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 ADHFE1Q8IWW8 467 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-220ENST00000482195 GLG1Q92896 1179 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
DDX39B-220ENST00000482195 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 ZMYND15Q9H091 742 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 PRKAG3Q9UGI9 489 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 TUBE1Q9UJT0 475 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 PLXNA4Q9HCM2 1894 aa11.86□□□□□ -0.51
DDX39B-220ENST00000482195 NCK2O43639 380 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 CHRNA1P02708 482 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 CYP21A2P08686 494 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 BMPR1AP36894 532 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 NDUFV1P49821 464 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 LPIN1Q14693 890 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 TAF2Q6P1X5 1199 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 GIMAP8Q8ND71 665 aaPredicted RBP11.85□□□□□ -0.51
DDX39B-220ENST00000482195 DNAJB3Q8WWF6 145 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 RUFY2Q8WXA3 655 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
DDX39B-220ENST00000482195 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
DDX39B-220ENST00000482195 FAM49AQ9H0Q0 323 aaPredicted RBP11.85□□□□□ -0.51
DDX39B-220ENST00000482195 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
DDX39B-220ENST00000482195 E7EWF7 191 aa11.84□□□□□ -0.51
DDX39B-220ENST00000482195 C5orf67F2Z3F1 127 aa11.84□□□□□ -0.51
DDX39B-220ENST00000482195 M0QZ92 97 aa11.84□□□□□ -0.51
DDX39B-220ENST00000482195 RB1P06400 928 aa11.84□□□□□ -0.51
DDX39B-220ENST00000482195 KIF5BP33176 963 aa11.84□□□□□ -0.51
DDX39B-220ENST00000482195 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX39B-220ENST00000482195 PTH1RQ03431 593 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms