RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 SFR1Q86XK3 245 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 GOLGA5Q8TBA6 731 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 ZHX3Q9H4I2 956 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 VAV3Q9UKW4 847 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 TRAF3IP3Q9Y228 551 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 A0A087X0T9 212 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 FAM228BP0C875 321 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 RAPGEF1Q13905 1077 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 NAB2Q15742 525 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 USH1GQ495M9 461 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 STRIP1Q5VSL9 837 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 RIN2Q8WYP3 895 aaPredicted RBP23.17■■□□□ 1.3
LIMS2-214ENST00000476932 TBC1D5Q92609 795 aa23.17■■□□□ 1.3
LIMS2-214ENST00000476932 CETN3O15182 167 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 NPM3O75607 178 aaKnown RBP23.16■■□□□ 1.3
LIMS2-214ENST00000476932 PDE6BP35913 854 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 FKBP1AP62942 108 aaKnown RBP23.16■■□□□ 1.3
LIMS2-214ENST00000476932 MRPS25P82663 173 aaKnown RBP23.16■■□□□ 1.3
LIMS2-214ENST00000476932 HDLBPQ00341 1268 aaKnown RBP23.16■■□□□ 1.3
LIMS2-214ENST00000476932 SYDE2Q5VT97 1194 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 FBXO11Q86XK2 927 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 FAM133AQ8N9E0 248 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 KLRC1P26715 233 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 CIITAP33076 1130 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 CCDC70Q6NSX1 233 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 HDAC9Q9UKV0 1011 aa23.16■■□□□ 1.3
LIMS2-214ENST00000476932 MSH4O15457 936 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 CAPN2P17655 700 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 GGCXP38435 758 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 KNOP1Q1ED39 458 aaKnown RBP23.15■■□□□ 1.3
LIMS2-214ENST00000476932 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 ERMNQ8TAM6 284 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 MS4A14Q96JA4 679 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 PACSIN1Q9BY11 444 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 RBM12Q9NTZ6 932 aaKnown RBP23.15■■□□□ 1.3
LIMS2-214ENST00000476932 DNM3Q9UQ16 869 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 PCDHGC5Q9Y5F6 944 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 PALMO75781 387 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 MYBP10242 640 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 MATR3P43243 847 aaKnown RBP eCLIP23.15■■□□□ 1.3
LIMS2-214ENST00000476932 RBM5P52756 815 aaKnown RBP eCLIP23.15■■□□□ 1.3
LIMS2-214ENST00000476932 SLC7A5Q01650 507 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 ABCB5Q2M3G0 1257 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 CCDC181Q5TID7 509 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-214ENST00000476932 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 TSKSQ9UJT2 592 aa23.15■■□□□ 1.3
LIMS2-214ENST00000476932 ATRNL1Q5VV63 1379 aa23.14■■□□□ 1.3
LIMS2-214ENST00000476932 RSPH10B2B2RC85 870 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 RSPH10BP0C881 870 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 ACTN1P12814 892 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 ARID5AQ03989 594 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 RRP1BQ14684 758 aaKnown RBP23.14■■□□□ 1.29
LIMS2-214ENST00000476932 ASIC2Q16515 512 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 KRT27Q7Z3Y8 459 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 FRMD5Q7Z6J6 570 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 CYP2W1Q8TAV3 490 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 FAM20AQ96MK3 541 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 ASTN1O14525 1302 aa23.14■■□□□ 1.29
LIMS2-214ENST00000476932 SPDYE3A6NKU9 549 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 ECE2O60344 883 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 FOSP01100 380 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-214ENST00000476932 MMP10P09238 476 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 KLHL30Q0D2K2 578 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 BMT2Q1RMZ1 405 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 AKT1S1Q96B36 256 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 RUSC1Q9BVN2 902 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 STIM2Q9P246 746 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 SLC9A1P19634 815 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 HOXA13P31271 388 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-214ENST00000476932 BTNL9Q6UXG8 535 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 TRIM34Q9BYJ4 488 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 PLCB1Q9NQ66 1216 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 ADAMTS1Q9UHI8 967 aa23.13■■□□□ 1.29
LIMS2-214ENST00000476932 TNFRSF8P28908 595 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 EPS15P42566 896 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 CYP4A11Q02928 519 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 IRF2BP2Q7Z5L9 587 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 LUC7LQ9NQ29 371 aaKnown RBP23.12■■□□□ 1.29
LIMS2-214ENST00000476932 ARMCX3Q9UH62 379 aaPredicted RBP23.12■■□□□ 1.29
LIMS2-214ENST00000476932 TULP2O00295 520 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 EML1O00423 815 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 PDXKO00764 312 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 AKAP3O75969 853 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 FTCDO95954 541 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 PAFAH1B1P43034 410 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 NAP1L1P55209 391 aaKnown RBP23.12■■□□□ 1.29
LIMS2-214ENST00000476932 SND1Q7KZF4 910 aaKnown RBP eCLIP23.12■■□□□ 1.29
LIMS2-214ENST00000476932 TMX4Q9H1E5 349 aaPredicted RBP23.12■■□□□ 1.29
LIMS2-214ENST00000476932 SERPINA10Q9UK55 444 aa23.12■■□□□ 1.29
LIMS2-214ENST00000476932 A0A1W2PRG0 241 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 GH2P01242 217 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 BMP3P12645 472 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 KIAA0753Q2KHM9 967 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 MEI1Q5TIA1 1274 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 AFAP1L1Q8TED9 768 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 ZNF622Q969S3 477 aaKnown RBP eCLIP23.11■■□□□ 1.29
LIMS2-214ENST00000476932 BHMT2Q9H2M3 363 aa23.11■■□□□ 1.29
LIMS2-214ENST00000476932 IGLV3-22A0A075B6J6 115 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms