RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 SFR1Q86XK3 245 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 CAPZA3Q96KX2 299 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 CYP3A7-CYP3A51PA0A087WV96 503 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 PPFIA4O75335 1185 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 ZBTB7AO95365 584 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
RNF220-211ENST00000474956 CYP3A7P24462 503 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 SREBF1P36956 1147 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 MEA1Q16626 185 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 JAKMIP2Q96AA8 810 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 MBOAT7Q96N66 472 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 ERGIC2Q96RQ1 377 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 MLXIPQ9HAP2 919 aa13.72□□□□□ -0.21
RNF220-211ENST00000474956 ANO9A1A5B4 782 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 EIF3CLB5ME19 914 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 ZNF76P36508 570 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 ARID5AQ03989 594 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 SEMA3FQ13275 785 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 GIT2Q14161 759 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 HYIQ5T013 277 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 NOC3LQ8WTT2 800 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 PSMB7Q99436 277 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 EIF3CQ99613 913 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 CENPFP49454 3210 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 IGLV3-22A0A075B6J6 115 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 MRPS25P82663 173 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 ZBED6P86452 979 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 FKBP15Q5T1M5 1219 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 PURBQ96QR8 312 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 NUP58Q9BVL2 599 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 KCTD10Q9H3F6 313 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 ZNHIT6Q9NWK9 470 aaKnown RBP13.71□□□□□ -0.21
RNF220-211ENST00000474956 SALL4Q9UJQ4 1053 aa13.71□□□□□ -0.21
RNF220-211ENST00000474956 ACTN1P12814 892 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 INPP5BP32019 993 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
RNF220-211ENST00000474956 CXCL9Q07325 125 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 MAN2A1Q16706 1144 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 RETREG2Q8NC44 543 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
RNF220-211ENST00000474956 NOL4O94818 638 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 ARP10275 920 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 CORO7P57737 925 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 HOMER2Q9NSB8 354 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 SMARCAL1Q9NZC9 954 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 TMOD2Q9NZR1 351 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 TMX2Q9Y320 296 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 WNT10BO00744 389 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 CLIC2O15247 247 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 GFPT1Q06210 699 aaPredicted RBP13.7□□□□□ -0.22
RNF220-211ENST00000474956 COBLL1Q53SF7 1204 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 TPH2Q8IWU9 490 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 CAGE1Q8TC20 777 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 FAM151AQ8WW52 585 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 BAP1Q92560 729 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
RNF220-211ENST00000474956 COL20A1Q9P218 1284 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 BCS1LQ9Y276 419 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 CAPN6Q9Y6Q1 641 aa13.7□□□□□ -0.22
RNF220-211ENST00000474956 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 CASP4P49662 377 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 AP3B2Q13367 1082 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 TBC1D10BQ4KMP7 808 aaPredicted RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 BTNL9Q6UXG8 535 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 IL31RAQ8NI17 732 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 NT5C3AQ9H0P0 336 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 ABCB11O95342 1321 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 TLR2O60603 784 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
RNF220-211ENST00000474956 LRRC63Q05C16 580 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 PDE4CQ08493 712 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 Q4G0T1 1027 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 DYDC2Q96IM9 177 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 EHD2Q9NZN4 543 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 COL4A3BPQ9Y5P4 624 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 MAEAQ7L5Y9 396 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 CPXCR1Q8N123 301 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 SELENOOQ9BVL4 669 aa13.69□□□□□ -0.22
RNF220-211ENST00000474956 NFIBO00712 420 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 ZMYND10O75800 440 aa13.68□□□□□ -0.22
RNF220-211ENST00000474956 GGCXP38435 758 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms