RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MFSD5Q6N075 450 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 PDXDC2PQ6P474 469 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 MIER3Q7Z3K6 550 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 NOSTRINQ8IVI9 506 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 CAGE1Q8TC20 777 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 SNX21Q969T3 373 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 GDF15Q99988 308 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 NOC4LQ9BVI4 516 aaKnown RBP15.52■□□□□ 0.08
USF1-205ENST00000473969 RNPEPQ9H4A4 650 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 DISC1Q9NRI5 854 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 SETD4Q9NVD3 440 aa15.52■□□□□ 0.08
USF1-205ENST00000473969 COLQQ9Y215 455 aaPredicted RBP15.52■□□□□ 0.08
USF1-205ENST00000473969 SCN10AQ9Y5Y9 1956 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 RRN3P2A6NIE6 340 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 NEMFO60524 1076 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 PSMD10O75832 226 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 CYP2C18P33260 490 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 CCL23P55773 120 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 CALCRLQ16602 461 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 RPUSD2Q8IZ73 545 aaKnown RBP15.51■□□□□ 0.07
USF1-205ENST00000473969 RDM1Q8NG50 284 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 ETNPPLQ8TBG4 499 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 GABBR1Q9UBS5 961 aa15.51■□□□□ 0.07
USF1-205ENST00000473969 IGKV6D-21A0A0A0MT36 114 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 HBP1O60381 514 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
USF1-205ENST00000473969 MCM7P33993 719 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 TRAPPC10P48553 1259 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 IGBP1P78318 339 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
USF1-205ENST00000473969 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 AFAP1L1Q8TED9 768 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 GJA10Q969M2 543 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
USF1-205ENST00000473969 PCYT2Q99447 389 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 KCNMB3Q9NPA1 279 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 NRBP2Q9NSY0 501 aa15.5■□□□□ 0.07
USF1-205ENST00000473969 A0A1W2PPC1 479 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 TREHO43280 583 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 DKC1O60832 514 aaKnown RBP eCLIP15.49■□□□□ 0.07
USF1-205ENST00000473969 ITGB8P26012 769 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
USF1-205ENST00000473969 PLCB4Q15147 1175 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 GRIK4Q16099 956 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 RSPH3Q86UC2 560 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 CCDC60Q8IWA6 550 aaPredicted RBP15.49■□□□□ 0.07
USF1-205ENST00000473969 FAM167AQ96KS9 214 aa15.49■□□□□ 0.07
USF1-205ENST00000473969 DOCK5Q9H7D0 1870 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 PARNO95453 639 aaKnown RBP15.48■□□□□ 0.07
USF1-205ENST00000473969 INSRRP14616 1297 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 CSF2RAP15509 400 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 RFC2P35250 354 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 ZNF174Q15697 407 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 TTC38Q5R3I4 469 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 TRMT1LQ7Z2T5 733 aaKnown RBP15.48■□□□□ 0.07
USF1-205ENST00000473969 SERINC5Q86VE9 423 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 TDHQ8IZJ6 230 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 ATP8B4Q8TF62 1192 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 LMBR1Q8WVP7 490 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
USF1-205ENST00000473969 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 PCDHA12Q9UN75 941 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 CEP131Q9UPN4 1083 aa15.48■□□□□ 0.07
USF1-205ENST00000473969 MAFBQ9Y5Q3 323 aaPredicted RBP15.48■□□□□ 0.07
USF1-205ENST00000473969 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
USF1-205ENST00000473969 KIF28PB7ZC32 967 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 RPLP2P05387 115 aaKnown RBP15.47■□□□□ 0.07
USF1-205ENST00000473969 IQCF3P0C7M6 154 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 SELPP16109 830 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 THPOP40225 353 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 TXKP42681 527 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 PPP2R5CQ13362 524 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 ZNF484Q5JVG2 852 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 NCAPH2Q6IBW4 605 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 TAF2Q6P1X5 1199 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 LRRC8DQ7L1W4 858 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 HAS1Q92839 578 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 SCLYQ96I15 445 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 FTOQ9C0B1 505 aaKnown RBP eCLIP15.47■□□□□ 0.07
USF1-205ENST00000473969 MTIF3Q9H2K0 278 aaKnown RBP15.47■□□□□ 0.07
USF1-205ENST00000473969 IL23AQ9NPF7 189 aa15.47■□□□□ 0.07
USF1-205ENST00000473969 CEP290O15078 2479 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 CAND2O75155 1236 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 PFKMP08237 780 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 CKBP12277 381 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 HOXC8P31273 242 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 PSMC5P62195 406 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 EPHA7Q15375 998 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 TMEM266Q2M3C6 531 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 RILPL1Q5EBL4 403 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 PSRC1Q6PGN9 363 aaPredicted RBP15.46■□□□□ 0.07
USF1-205ENST00000473969 DEFB128Q7Z7B8 93 aa15.46■□□□□ 0.07
USF1-205ENST00000473969 TTC12Q9H892 705 aaPredicted RBP15.46■□□□□ 0.07
USF1-205ENST00000473969 COL1A2P08123 1366 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms