RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 TRIM50Q86XT4 487 aa16.12■□□□□ 0.17
SMURF1-203ENST00000472627 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
SMURF1-203ENST00000472627 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
SMURF1-203ENST00000472627 TRPC6Q9Y210 931 aa16.12■□□□□ 0.17
SMURF1-203ENST00000472627 SQORQ9Y6N5 450 aa16.12■□□□□ 0.17
SMURF1-203ENST00000472627 PRR23AA6NEV1 266 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 GLP2RO95838 553 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 DNAJB1P25685 340 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 NBL1P41271 181 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 ID4P47928 161 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 MGAT3Q09327 533 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 SUSD6Q92537 303 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SMURF1-203ENST00000472627 NKD2Q969F2 451 aaPredicted RBP16.11■□□□□ 0.17
SMURF1-203ENST00000472627 INPP4AQ96PE3 977 aaPredicted RBP16.11■□□□□ 0.17
SMURF1-203ENST00000472627 ERAP1Q9NZ08 941 aa16.11■□□□□ 0.17
SMURF1-203ENST00000472627 KLRF2D3W0D1 207 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 SCG2P13521 617 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 MRPS6P82932 125 aaKnown RBP16.1■□□□□ 0.17
SMURF1-203ENST00000472627 SP4Q02446 784 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 IFIT1BQ5T764 474 aaKnown RBP16.1■□□□□ 0.17
SMURF1-203ENST00000472627 ASCL5Q7RTU5 278 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 NLRX1Q86UT6 975 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 HOMER1Q86YM7 354 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
SMURF1-203ENST00000472627 SENP7Q9BQF6 1050 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 KRT23Q9C075 422 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 TTC3P53804 2025 aa16.1■□□□□ 0.17
SMURF1-203ENST00000472627 CACNA1AO00555 2505 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 PPFIA3O75145 1194 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 HOXB8P17481 243 aaPredicted RBP16.09■□□□□ 0.17
SMURF1-203ENST00000472627 PAK2Q13177 524 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 GRIK4Q16099 956 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 DUSP6Q16828 381 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 XRRA1Q6P2D8 792 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 RUFY4Q6ZNE9 571 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
SMURF1-203ENST00000472627 ATP8B4Q8TF62 1192 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 DNAJB3Q8WWF6 145 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 GLG1Q92896 1179 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
SMURF1-203ENST00000472627 CDHR1Q96JP9 859 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 MFSD1Q9H3U5 465 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 SORCS3Q9UPU3 1222 aa16.09■□□□□ 0.17
SMURF1-203ENST00000472627 SPTBN4Q9H254 2564 aa16.08■□□□□ 0.17
SMURF1-203ENST00000472627 B4E1Z4 1266 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 CD52P31358 61 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
SMURF1-203ENST00000472627 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.16
SMURF1-203ENST00000472627 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 THNSL1Q8IYQ7 743 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 KREMEN2Q8NCW0 462 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 CUL5Q93034 780 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 MTMR8Q96EF0 704 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 TSHZ2Q9NRE2 1034 aa16.08■□□□□ 0.16
SMURF1-203ENST00000472627 PUF60Q9UHX1 559 aaKnown RBP16.08■□□□□ 0.16
SMURF1-203ENST00000472627 KAT6AQ92794 2004 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 MBLAC1A4D2B0 266 aaPredicted RBP16.07■□□□□ 0.16
SMURF1-203ENST00000472627 RRN3P2A6NIE6 340 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 PER2O15055 1255 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 TECP42680 631 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
SMURF1-203ENST00000472627 CES5AQ6NT32 575 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 NECTIN4Q96NY8 510 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 SMARCAD1Q9H4L7 1026 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 RTEL1Q9NZ71 1219 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 ZSWIM5Q9P217 1185 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 PCDHB7Q9Y5E2 793 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 TRPV2Q9Y5S1 764 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
SMURF1-203ENST00000472627 PPP1R11O60927 126 aaPredicted RBP16.06■□□□□ 0.16
SMURF1-203ENST00000472627 MARK3P27448 753 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 MRPS9P82933 396 aaKnown RBP16.06■□□□□ 0.16
SMURF1-203ENST00000472627 TPRNQ4KMQ1 711 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 ANKRD54Q6NXT1 300 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 TMEM184AQ6ZMB5 413 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 LINC01599Q8WXQ3 324 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 FAM49AQ9H0Q0 323 aaPredicted RBP16.06■□□□□ 0.16
SMURF1-203ENST00000472627 BCAS3Q9H6U6 928 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 AGO3Q9H9G7 860 aaKnown RBP16.06■□□□□ 0.16
SMURF1-203ENST00000472627 PADI3Q9ULW8 664 aa16.06■□□□□ 0.16
SMURF1-203ENST00000472627 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
SMURF1-203ENST00000472627 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 PNMA6FA0A0J9YX94 578 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 FGF18O76093 207 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 IBSPP21815 317 aaPredicted RBP16.05■□□□□ 0.16
SMURF1-203ENST00000472627 SARSP49591 514 aaKnown RBP16.05■□□□□ 0.16
SMURF1-203ENST00000472627 PDE1AP54750 535 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 IGBP1P78318 339 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
SMURF1-203ENST00000472627 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms