RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PDXDC2PQ6P474 469 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 RETREG2Q8NC44 543 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 CAGE1Q8TC20 777 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 UIMC1Q96RL1 719 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 GDF15Q99988 308 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 DISC1Q9NRI5 854 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 TELO2Q9Y4R8 837 aa16.03■□□□□ 0.16
BRCA1-211ENST00000472490 FAM205CA6NFA0 338 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 RRN3P2A6NIE6 340 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 MARK3P27448 753 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 PTK7Q13308 1070 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 CALCRLQ16602 461 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 MFSD5Q6N075 450 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 SWSAP1Q6NVH7 229 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 CKAP2LQ8IYA6 745 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 BADQ92934 168 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 UBE2OQ9C0C9 1292 aaKnown RBP16.02■□□□□ 0.16
BRCA1-211ENST00000472490 RNPEPQ9H4A4 650 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 TRPC6Q9Y210 931 aa16.02■□□□□ 0.16
BRCA1-211ENST00000472490 A0A1W2PPC1 479 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 POTEB3A0JP26 581 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 CHMP2AO43633 222 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PARNO95453 639 aaKnown RBP16.01■□□□□ 0.15
BRCA1-211ENST00000472490 RPLP2P05387 115 aaKnown RBP16.01■□□□□ 0.15
BRCA1-211ENST00000472490 CYP2C9P11712 490 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 ATP2B1P20020 1258 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 HOXC8P31273 242 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 FPGSQ05932 587 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PPFIA1Q13136 1202 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PPP2R5CQ13362 524 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PPIGQ13427 754 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRCA1-211ENST00000472490 POTEBQ6S5H4 581 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 MIER3Q7Z3K6 550 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PPP1R13LQ8WUF5 828 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PCYT2Q99447 389 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 NOC4LQ9BVI4 516 aaKnown RBP16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PPP1R12CQ9BZL4 782 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 UNC45AQ9H3U1 944 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
BRCA1-211ENST00000472490 MAFBQ9Y5Q3 323 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-211ENST00000472490 HBP1O60381 514 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 DKC1O60832 514 aaKnown RBP eCLIP16■□□□□ 0.15
BRCA1-211ENST00000472490 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
BRCA1-211ENST00000472490 MCM7P33993 719 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 GRIK4Q16099 956 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 RILPL1Q5EBL4 403 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 TTC38Q5R3I4 469 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 SERINC5Q86VE9 423 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 CCDC60Q8IWA6 550 aaPredicted RBP16■□□□□ 0.15
BRCA1-211ENST00000472490 RPUSD2Q8IZ73 545 aaKnown RBP16■□□□□ 0.15
BRCA1-211ENST00000472490 ATP8B4Q8TF62 1192 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
BRCA1-211ENST00000472490 SETD4Q9NVD3 440 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 GABBR1Q9UBS5 961 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
BRCA1-211ENST00000472490 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 KIF28PB7ZC32 967 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 CAND2O75155 1236 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 PFKMP08237 780 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 ITGB8P26012 769 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 CYP2C18P33260 490 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 RFC2P35250 354 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 PLCB4Q15147 1175 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 B3GNT9Q6UX72 402 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 RSPH3Q86UC2 560 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 HAS1Q92839 578 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 GJA10Q969M2 543 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 NRBP2Q9NSY0 501 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
BRCA1-211ENST00000472490 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
BRCA1-211ENST00000472490 TREHO43280 583 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 INSRRP14616 1297 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 RBL2Q08999 1139 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 ZNF484Q5JVG2 852 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 BRAPQ7Z569 592 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 MTMR9Q96QG7 549 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 CTAGE1Q96RT6 745 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 TTC12Q9H892 705 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-211ENST00000472490 VAV3Q9UKW4 847 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 TNRC18O15417 2968 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-211ENST00000472490 COL1A2P08123 1366 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
BRCA1-211ENST00000472490 IGSF9BQ9UPX0 1349 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 MBLAC1A4D2B0 266 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-211ENST00000472490 VPS37CA5D8V6 355 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-211ENST00000472490 LAD1O00515 517 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 P4HBP07237 508 aaKnown RBP15.97■□□□□ 0.15
BRCA1-211ENST00000472490 IQCF3P0C7M6 154 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 CKBP12277 381 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 CSF2RAP15509 400 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 SELPP16109 830 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 TXKP42681 527 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 CCL23P55773 120 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 PSMC5P62195 406 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms