RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 TGS1Q96RS0 853 aaKnown RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 MPHOSPH6Q99547 160 aaKnown RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 MAF1Q9H063 256 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 PUS7LQ9H0K6 701 aaKnown RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 CHMP4BQ9H444 224 aaKnown RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 SUGCTQ9HAC7 445 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 CD320Q9NPF0 282 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 RNF146Q9NTX7 359 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 TNNQ9UQP3 1299 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 FAM50BQ9Y247 325 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 USTQ9Y2C2 406 aa6.88□□□□□ -1.31
ITGB1-209ENST00000472147 ZFHX2Q9C0A1 2572 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-209ENST00000472147 CFAP54Q96N23 3096 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 ZNF536O15090 1300 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 H3BM21 787 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 ZFYP08048 801 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-209ENST00000472147 ALAS1P13196 640 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 MCCP23508 829 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 SLC1A4P43007 532 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 TFAP4Q01664 338 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 PDE4BQ07343 736 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 IKBKEQ14164 716 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 PKN1Q16512 942 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 KRT40Q6A162 431 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 CCDC155Q8N6L0 562 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-209ENST00000472147 CAGE1Q8TC20 777 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 AFAP1L1Q8TED9 768 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 SCG3Q8WXD2 468 aaKnown RBP6.87□□□□□ -1.31
ITGB1-209ENST00000472147 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 MFSD14AQ96MC6 490 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 NIFKQ9BYG3 293 aaKnown RBP6.87□□□□□ -1.31
ITGB1-209ENST00000472147 NACAP1Q9BZK3 213 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 UBE2ZQ9H832 354 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-209ENST00000472147 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 INSL6Q9Y581 213 aa6.87□□□□□ -1.31
ITGB1-209ENST00000472147 MYH1P12882 1939 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 PLXNA1Q9UIW2 1896 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 RAD50Q92878 1312 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 FRMPD3Q5JV73 1810 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 DCXO43602 365 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 GJB5O95377 273 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 CXCL10P02778 98 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 APPP05067 770 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 ICAM1P05362 532 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 MYL3P08590 195 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 TSPY3P0CV98 308 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 TSPY8P0CW00 308 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 SELPP16109 830 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 NOS2P35228 1153 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 PHKA2P46019 1235 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 NHLH1Q02575 133 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 PTSQ03393 145 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-209ENST00000472147 BAATQ14032 418 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-209ENST00000472147 PTGISQ16647 500 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 PTPROQ16827 1216 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 TMEM63BQ5T3F8 832 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 XP32Q5T750 250 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 EEPD1Q7L9B9 569 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 SESTD1Q86VW0 696 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 TMEM151AQ8N4L1 468 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 DNERQ8NFT8 737 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 NEK9Q8TD19 979 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 SCFD2Q8WU76 684 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 UIMC1Q96RL1 719 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 PRRX2Q99811 253 aa6.86□□□□□ -1.31
ITGB1-209ENST00000472147 TCF20Q9UGU0 1960 aaKnown RBP6.86□□□□□ -1.31
ITGB1-209ENST00000472147 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 CCER2I3L3R5 266 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 EML1O00423 815 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 RNF113AO15541 343 aaKnown RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 PRMT3O60678 531 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 CASTP20810 708 aaKnown RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 KCNA5P22460 613 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 PSMA6P60900 246 aaKnown RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 WDR5P61964 334 aaKnown RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 RBL2Q08999 1139 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 GPNMBQ14956 572 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 FAM47CQ5HY64 1035 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 CNKSR3Q6P9H4 555 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 BTNL9Q6UXG8 535 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 NSMFQ6X4W1 530 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 FBXO16Q8IX29 292 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 OR6J1Q8NGC5 347 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 SNX27Q96L92 541 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 FBXL18Q96ME1 805 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 SAMD11Q96NU1 681 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 PRR12Q9ULL5 1215 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 PTPRZ1P23471 2315 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-209ENST00000472147 FOCADQ5VW36 1801 aa6.85□□□□□ -1.31
ITGB1-209ENST00000472147 LINC01553A4QN01 128 aa6.84□□□□□ -1.31
ITGB1-209ENST00000472147 PPFIA4O75335 1185 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms