RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 RPAINQ86UA6 219 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
HLA-C-206ENST00000470363 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
HLA-C-206ENST00000470363 CUL5Q93034 780 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
HLA-C-206ENST00000470363 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
HLA-C-206ENST00000470363 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
HLA-C-206ENST00000470363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-206ENST00000470363 hCG_1642624A0A1W2PR95 340 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-206ENST00000470363 CHRNA1P02708 482 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 GJB2P29033 226 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-206ENST00000470363 KCNQ1P51787 676 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 NTRK3Q16288 839 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 TYW1BQ6NUM6 668 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 MICALL1Q8N3F8 863 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 GIMAP8Q8ND71 665 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-206ENST00000470363 LMBR1Q8WVP7 490 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 TGS1Q96RS0 853 aaKnown RBP13.18□□□□□ -0.3
HLA-C-206ENST00000470363 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 EHMT1Q9H9B1 1298 aa13.18□□□□□ -0.3
HLA-C-206ENST00000470363 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.18□□□□□ -0.3
HLA-C-206ENST00000470363 NRCAMQ92823 1304 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-206ENST00000470363 CPLX1O14810 134 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 MAFGO15525 162 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 GNAT1P11488 350 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-206ENST00000470363 FOSBP53539 338 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 UBE2SQ16763 222 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 NLRX1Q86UT6 975 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 SEPT1Q8WYJ6 367 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 PHKBQ93100 1093 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-206ENST00000470363 UHRF1Q96T88 793 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-206ENST00000470363 PCYT2Q99447 389 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-206ENST00000470363 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 PCDHA6Q9UN73 950 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 COG5Q9UP83 839 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 INSL6Q9Y581 213 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 PCDHA8Q9Y5H6 950 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 NID2Q14112 1375 aa13.17□□□□□ -0.3
HLA-C-206ENST00000470363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.16□□□□□ -0.3
HLA-C-206ENST00000470363 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 RCAN1P53805 252 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 MGAT3Q09327 533 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 AAK1Q2M2I8 961 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
HLA-C-206ENST00000470363 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 GDPD5Q8WTR4 605 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
HLA-C-206ENST00000470363 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
HLA-C-206ENST00000470363 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
HLA-C-206ENST00000470363 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 AMHP03971 560 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 CTSHP09668 335 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 FDPSP14324 419 aaKnown RBP13.15□□□□□ -0.3
HLA-C-206ENST00000470363 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 SP4Q02446 784 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 MTMR1Q13613 665 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 FAM117BQ6P1L5 589 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 CRIPAKQ8N1N5 446 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 SEPT8Q92599 483 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 HLA-CQ95604 372 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 C17orf80Q9BSJ5 609 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
HLA-C-206ENST00000470363 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
HLA-C-206ENST00000470363 ORC3Q9UBD5 711 aaPredicted RBP13.15□□□□□ -0.3
HLA-C-206ENST00000470363 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 ATG7O95352 703 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 IFNAR1P17181 557 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 DDIT3P35638 169 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
HLA-C-206ENST00000470363 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
HLA-C-206ENST00000470363 PKP1Q13835 747 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 CPLX2Q6PUV4 134 aaKnown RBP13.14□□□□□ -0.31
HLA-C-206ENST00000470363 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 CRYGNQ8WXF5 182 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 APBB2Q92870 758 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 RC3H2Q9HBD1 1191 aaKnown RBP13.14□□□□□ -0.31
HLA-C-206ENST00000470363 ERAP1Q9NZ08 941 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
HLA-C-206ENST00000470363 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
HLA-C-206ENST00000470363 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
HLA-C-206ENST00000470363 SPDYE3A6NKU9 549 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms