RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 OTOP3Q7RTS5 596 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 MAMDC2Q7Z304 686 aaPredicted RBP6.08□□□□□ -1.44
VPS8-217ENST00000465213 ZFPM1Q8IX07 1006 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 FAM9AQ8IZU1 332 aaPredicted RBP6.08□□□□□ -1.44
VPS8-217ENST00000465213 LILRB2Q8N423 598 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 TTLL11Q8NHH1 800 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 IPO9Q96P70 1041 aaKnown RBP6.08□□□□□ -1.44
VPS8-217ENST00000465213 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 MENTQ9BUN1 341 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 PCED1AQ9H1Q7 454 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 DEF6Q9H4E7 631 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 BARX1Q9HBU1 254 aaPredicted RBP6.08□□□□□ -1.44
VPS8-217ENST00000465213 MYOTQ9UBF9 498 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 ADAM29Q9UKF5 820 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 CROTQ9UKG9 612 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 TCAF1Q9Y4C2 921 aa6.08□□□□□ -1.44
VPS8-217ENST00000465213 ARID4BQ4LE39 1312 aaPredicted RBP6.07□□□□□ -1.44
VPS8-217ENST00000465213 KRIT1O00522 736 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 ZNF623O75123 536 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 COL6A2P12110 1019 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 TAF7LQ5H9L4 462 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 ZC3H12BQ5HYM0 836 aaKnown RBP6.07□□□□□ -1.44
VPS8-217ENST00000465213 ZNF585AQ6P3V2 769 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 IPPKQ9H8X2 491 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 BCCIPQ9P287 314 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS8-217ENST00000465213 ASH2LQ9UBL3 628 aa6.07□□□□□ -1.44
VPS8-217ENST00000465213 FAM47E-STBD1D6RA91 191 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 AQP7O14520 342 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 SLC27A2O14975 620 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 MUSKO15146 869 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS8-217ENST00000465213 B4GALT4O60513 344 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 MAFKO60675 156 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 AMHP03971 560 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 CHGBP05060 677 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 GABREP78334 506 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 TRMT10BQ6PF06 316 aaKnown RBP6.06□□□□□ -1.44
VPS8-217ENST00000465213 PROSER1Q86XN7 944 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 PALM2Q8IXS6 379 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 RBM12BQ8IXT5 1001 aaKnown RBP6.06□□□□□ -1.44
VPS8-217ENST00000465213 THAP3Q8WTV1 239 aaPredicted RBP6.06□□□□□ -1.44
VPS8-217ENST00000465213 CLEC4DQ8WXI8 215 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 PTPN18Q99952 460 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 ALG1Q9BT22 464 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 SEC61A2Q9H9S3 476 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 JADE2Q9NQC1 790 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 PCDHA8Q9Y5H6 950 aa6.06□□□□□ -1.44
VPS8-217ENST00000465213 WNT9AO14904 365 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 KLHL18O94889 574 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 GNAT1P11488 350 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 SPIRE1Q08AE8 756 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 PAK1Q13153 545 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 BMS1Q14692 1282 aaKnown RBP6.05□□□□□ -1.44
VPS8-217ENST00000465213 DTX3Q8N9I9 347 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 PCDH19Q8TAB3 1148 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 UHMK1Q8TAS1 419 aaKnown RBP6.05□□□□□ -1.44
VPS8-217ENST00000465213 Q8TCH9 128 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 PSMD1Q99460 953 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 PDGFDQ9GZP0 370 aaPredicted RBP6.05□□□□□ -1.44
VPS8-217ENST00000465213 CADPSQ9ULU8 1353 aa6.05□□□□□ -1.44
VPS8-217ENST00000465213 ARVCFO00192 962 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 CNOT4O95628 575 aaKnown RBP6.04□□□□□ -1.44
VPS8-217ENST00000465213 GUCY1A3Q02108 690 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 GRIN1Q05586 938 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 C2orf27AQ580R0 203 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 SPDYAQ5MJ70 313 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 TMC5Q6UXY8 1006 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 MTDHQ86UE4 582 aaKnown RBP6.04□□□□□ -1.44
VPS8-217ENST00000465213 CERS3Q8IU89 383 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 TRIM48Q8IWZ4 208 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 ZSWIM2Q8NEG5 633 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 NUDT10Q8NFP7 164 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 UBXN4Q92575 508 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 NUDT11Q96G61 164 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 DLL4Q9NR61 685 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 TELO2Q9Y4R8 837 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 PCDHA9Q9Y5H5 950 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 PTCH2Q9Y6C5 1203 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 SLC4A7Q9Y6M7 1214 aa6.04□□□□□ -1.44
VPS8-217ENST00000465213 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.03□□□□□ -1.44
VPS8-217ENST00000465213 TCRBV5S4A2TA0A5A2 114 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 CLSTN1O94985 981 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 CRTAMO95727 393 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 LTFP02788 710 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 TUSC3Q13454 348 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 NFE2L2Q16236 605 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 CCDC144BQ3MJ40 725 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 Q6ZUG5 572 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 GSTCDQ8NEC7 633 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 SLC7A14Q8TBB6 771 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 SH3RF2Q8TEC5 729 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 AJUBAQ96IF1 538 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 ZSWIM4Q9H7M6 989 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 SLC52A2Q9HAB3 445 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 DSEQ9UL01 958 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 ZDHHC9Q9Y397 364 aa6.03□□□□□ -1.44
VPS8-217ENST00000465213 CCDC163A0A0D9SF12 145 aa6.02□□□□□ -1.45
VPS8-217ENST00000465213 KNG1P01042 644 aa6.02□□□□□ -1.45
VPS8-217ENST00000465213 EPHA5P54756 1037 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms