RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 PLPPR4Q7Z2D5 763 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 TRIM50Q86XT4 487 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 RDM1Q8NG50 284 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 TNPO1Q92973 898 aaKnown RBP18.33■□□□□ 0.52
SHANK1-205ENST00000461154 NOD1Q9Y239 953 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 PCDHA10Q9Y5I2 948 aa18.33■□□□□ 0.52
SHANK1-205ENST00000461154 CHMP2AO43633 222 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
SHANK1-205ENST00000461154 MCM7P33993 719 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHANK1-205ENST00000461154 STAT5BP51692 787 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHANK1-205ENST00000461154 LRIT3Q3SXY7 679 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 RILPL1Q5EBL4 403 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 BRAPQ7Z569 592 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
SHANK1-205ENST00000461154 DISC1Q9NRI5 854 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 HDAC6Q9UBN7 1215 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 GTF2IRD1Q9UHL9 959 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
SHANK1-205ENST00000461154 IGKV6D-21A0A0A0MT36 114 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 SMIM10L2AP0DMW4 78 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 SMIM10L2BP0DMW5 78 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 CYP2C9P11712 490 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 CYP2C18P33260 490 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 PPP2R5CQ13362 524 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 PTGISQ16647 500 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 MIER3Q7Z3K6 550 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 HAS1Q92839 578 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 GJA10Q969M2 543 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 PCYT2Q99447 389 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 UNC45AQ9H3U1 944 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 ZNF302Q9NR11 478 aa18.31■□□□□ 0.52
SHANK1-205ENST00000461154 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 WNT7AO00755 349 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 GNAT1P11488 350 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 MARK3P27448 753 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 BFSP2Q13515 415 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 SHHQ15465 462 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-205ENST00000461154 SWSAP1Q6NVH7 229 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 CCDC60Q8IWA6 550 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-205ENST00000461154 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 VAV3Q9UKW4 847 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 PCDHA12Q9UN75 941 aa18.3■□□□□ 0.52
SHANK1-205ENST00000461154 NRCAMQ92823 1304 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 C17orf102A2RUQ5 167 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 STX6O43752 255 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 CSF2RAP15509 400 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 ZNF174Q15697 407 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 PDXDC2PQ6P474 469 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 B3GNT9Q6UX72 402 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 CCDC155Q8N6L0 562 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 MTMR9Q96QG7 549 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 RNPEPQ9H4A4 650 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 TRPC6Q9Y210 931 aa18.29■□□□□ 0.52
SHANK1-205ENST00000461154 MAFBQ9Y5Q3 323 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-205ENST00000461154 UMODL1Q5DID0 1318 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 OR52Z1P0C646 297 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 TXKP42681 527 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 TOB1P50616 345 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-205ENST00000461154 EPHB4P54760 987 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 CCL23P55773 120 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 PPFIA1Q13136 1202 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 CKAP2LQ8IYA6 745 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 RPUSD2Q8IZ73 545 aaKnown RBP18.28■□□□□ 0.52
SHANK1-205ENST00000461154 CAGE1Q8TC20 777 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 FAM167AQ96KS9 214 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 TTC12Q9H892 705 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-205ENST00000461154 IL23AQ9NPF7 189 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 GABBR1Q9UBS5 961 aa18.28■□□□□ 0.52
SHANK1-205ENST00000461154 MYH9P35579 1960 aaKnown RBP18.28■□□□□ 0.52
SHANK1-205ENST00000461154 IGSF9BQ9UPX0 1349 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 POTEB3A0JP26 581 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 LAD1O00515 517 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 DKC1O60832 514 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHANK1-205ENST00000461154 HOXC8P31273 242 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 PLCB4Q15147 1175 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 NCAPH2Q6IBW4 605 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 PSRC1Q6PGN9 363 aaPredicted RBP18.27■□□□□ 0.52
SHANK1-205ENST00000461154 POTEBQ6S5H4 581 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 WNT8AQ9H1J5 351 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 TMEM60Q9H2L4 133 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 MTMR6Q9Y217 621 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 PCDHB6Q9Y5E3 794 aa18.27■□□□□ 0.52
SHANK1-205ENST00000461154 KAT6AQ92794 2004 aa18.27■□□□□ 0.51
SHANK1-205ENST00000461154 RRN3P2A6NIE6 340 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 HBP1O60381 514 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 PTK7Q13308 1070 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 NBR1Q14596 966 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 EPHA7Q15375 998 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 GRIK4Q16099 956 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 TMEM266Q2M3C6 531 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms