RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SMIM10L2AP0DMW4 78 aa24.58■■□□□ 1.53
SSNA1-202ENST00000459860 SMIM10L2BP0DMW5 78 aa24.58■■□□□ 1.53
SSNA1-202ENST00000459860 EARS2Q5JPH6 523 aaKnown RBP24.58■■□□□ 1.53
SSNA1-202ENST00000459860 COL25A1Q9BXS0 654 aaPredicted RBP24.58■■□□□ 1.53
SSNA1-202ENST00000459860 MYH9P35579 1960 aaKnown RBP24.58■■□□□ 1.52
SSNA1-202ENST00000459860 CDH23Q9H251 3354 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 CUL9Q8IWT3 2517 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 WDR64B1ANS9 1081 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 CCNE2O96020 404 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 CYP2C9P11712 490 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 MARK3P27448 753 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 FPGSQ05932 587 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 MFSD5Q6N075 450 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 TMEM199Q8N511 208 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 RNPC3Q96LT9 517 aaKnown RBP24.57■■□□□ 1.52
SSNA1-202ENST00000459860 NOC4LQ9BVI4 516 aaKnown RBP24.57■■□□□ 1.52
SSNA1-202ENST00000459860 TANC1Q9C0D5 1861 aa24.57■■□□□ 1.52
SSNA1-202ENST00000459860 H3BQV1 296 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 SLC37A4O43826 429 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 ATG7O95352 703 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 PSAPP07602 524 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 SLC26A2P50443 739 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 STAT5BP51692 787 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 BFSP2Q13515 415 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 CUL4AQ13619 759 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 ABHD15Q6UXT9 468 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 PLPPR4Q7Z2D5 763 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 ZNF302Q9NR11 478 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 PCDHA10Q9Y5I2 948 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 WDR81Q562E7 1941 aa24.56■■□□□ 1.52
SSNA1-202ENST00000459860 TRIP12Q14669 1992 aaPredicted RBP24.56■■□□□ 1.52
SSNA1-202ENST00000459860 K7ELQ4 463 aaPredicted RBP24.55■■□□□ 1.52
SSNA1-202ENST00000459860 TBX3O15119 743 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 CHMP2AO43633 222 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 BAG4O95429 457 aaKnown RBP24.55■■□□□ 1.52
SSNA1-202ENST00000459860 SFNP31947 248 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 CYP2C18P33260 490 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 JAK3P52333 1124 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 RETREG2Q8NC44 543 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 ETNPPLQ8TBG4 499 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 CAGE1Q8TC20 777 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 ATP6V0A1Q93050 837 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 FAM20AQ96MK3 541 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 NOL7Q9UMY1 257 aaKnown RBP24.55■■□□□ 1.52
SSNA1-202ENST00000459860 TRPC6Q9Y210 931 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 NRCAMQ92823 1304 aa24.55■■□□□ 1.52
SSNA1-202ENST00000459860 PITPNM1O00562 1244 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 PPFIA1Q13136 1202 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 PTK7Q13308 1070 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 PPIGQ13427 754 aaKnown RBP eCLIP24.54■■□□□ 1.52
SSNA1-202ENST00000459860 POTEDQ86YR6 584 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 NOSTRINQ8IVI9 506 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 HSCBQ8IWL3 235 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 AFAP1L1Q8TED9 768 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 MYLIPQ8WY64 445 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 PCYT2Q99447 389 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 RNPEPQ9H4A4 650 aa24.54■■□□□ 1.52
SSNA1-202ENST00000459860 IGKV6D-21A0A0A0MT36 114 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 PSMD10O75832 226 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 MCTP1Q6DN14 999 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 SWSAP1Q6NVH7 229 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 PDXDC2PQ6P474 469 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 CCDC60Q8IWA6 550 aaPredicted RBP24.53■■□□□ 1.52
SSNA1-202ENST00000459860 CKAP2LQ8IYA6 745 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 SLFN12Q8IYM2 578 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 RDM1Q8NG50 284 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 UNC45AQ9H3U1 944 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 KCNMB3Q9NPA1 279 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 DISC1Q9NRI5 854 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 SETD4Q9NVD3 440 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 VCANP13611 3396 aa24.53■■□□□ 1.52
SSNA1-202ENST00000459860 TMEM265A0A087WTH1 108 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 NEMFO60524 1076 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 ATP2B1P20020 1258 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 HOXC8P31273 242 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 CCL23P55773 120 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 C16orf59Q7L2K0 433 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 MIER3Q7Z3K6 550 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 MAFAQ8NHW3 353 aaPredicted RBP24.52■■□□□ 1.52
SSNA1-202ENST00000459860 LMBR1Q8WVP7 490 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 GJA10Q969M2 543 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 SNX21Q969T3 373 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 UMODL1Q5DID0 1318 aa24.52■■□□□ 1.52
SSNA1-202ENST00000459860 RRN3P2A6NIE6 340 aa24.51■■□□□ 1.51
SSNA1-202ENST00000459860 ZNF200P98182 395 aaPredicted RBP24.51■■□□□ 1.51
SSNA1-202ENST00000459860 PLCB4Q15147 1175 aa24.51■■□□□ 1.51
SSNA1-202ENST00000459860 GRIK4Q16099 956 aa24.51■■□□□ 1.51
SSNA1-202ENST00000459860 CALCRLQ16602 461 aa24.51■■□□□ 1.51
SSNA1-202ENST00000459860 LARP1BQ659C4 914 aaKnown RBP24.51■■□□□ 1.51
SSNA1-202ENST00000459860 GABBR1Q9UBS5 961 aa24.51■■□□□ 1.51
SSNA1-202ENST00000459860 SPTBN5Q9NRC6 3674 aaKnown RBP24.51■■□□□ 1.51
SSNA1-202ENST00000459860 POTEB3A0JP26 581 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 TREHO43280 583 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 CSF2RAP15509 400 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 PDCP20941 246 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 U2AF2P26368 475 aaKnown RBP eCLIP24.5■■□□□ 1.51
SSNA1-202ENST00000459860 TRAPPC10P48553 1259 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 ORC2Q13416 577 aaPredicted RBP24.5■■□□□ 1.51
SSNA1-202ENST00000459860 POTEBQ6S5H4 581 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 SERINC5Q86VE9 423 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms