RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 FAM71BQ8TC56 605 aa11.02□□□□□ -0.64
SCN10A-201ENST00000449082 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.64
SCN10A-201ENST00000449082 PHKA2P46019 1235 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 GPSM2P81274 684 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 PFKFB3Q16875 520 aaPredicted RBP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 DARS2Q6PI48 645 aaKnown RBP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 DNAAF3Q8N9W5 541 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 CCHCR1Q8TD31 782 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 BUB1BO60566 1050 aaPredicted RBP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 KRT76Q01546 638 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 RESTQ13127 1097 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 EPHA10Q5JZY3 1008 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 EFCC1Q9HA90 598 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 TOPORSQ9NS56 1045 aaPredicted RBP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 GOLGA8IPA6NC78 632 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 GOLGA8JA6NMD2 632 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 COPB2P35606 906 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 IRX4P78413 519 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 TTLL4Q14679 1199 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 SCARA5Q6ZMJ2 495 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 FTOQ9C0B1 505 aaKnown RBP eCLIP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 FDX1P10109 184 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 HSPA6P17066 643 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 CCDC170Q8IYT3 715 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 UHMK1Q8TAS1 419 aaKnown RBP11.02□□□□□ -0.65
SCN10A-201ENST00000449082 DAAM1Q9Y4D1 1078 aa11.02□□□□□ -0.65
SCN10A-201ENST00000449082 STK36Q9NRP7 1315 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 GOLGA8QA0A0J9YX86 632 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 GOLGA8OA6NCC3 632 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 POC1B-GALNT4F8VUJ3 575 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 F8W8V4 182 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 GOLGA8NF8WBI6 632 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ZNF667Q5HYK9 610 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 PARD3BQ8TEW8 1205 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 CALN1Q9BXU9 219 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ECEL1O95672 775 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ZBED6P86452 979 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 THOC5Q13769 683 aaKnown RBP11.01□□□□□ -0.65
SCN10A-201ENST00000449082 MAPK6Q16659 721 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 SLC35F6Q8N357 371 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCN10A-201ENST00000449082 NEK9Q8TD19 979 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 LRRC8CQ8TDW0 803 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 PBKQ96KB5 322 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 LMCD1Q9NZU5 365 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ARHGAP42A6NI28 874 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 IGSF3O75054 1194 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ASPHQ12797 758 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 FAM20AQ96MK3 541 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 MMP19Q99542 508 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 RASSF4Q9H2L5 321 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 UBN1Q9NPG3 1134 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 DCP1AQ9NPI6 582 aaPredicted RBP11.01□□□□□ -0.65
SCN10A-201ENST00000449082 CDC23Q9UJX2 597 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 NEDD4P46934 1319 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 WDR19Q8NEZ3 1342 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 IQGAP3Q86VI3 1631 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 PGRMC1O00264 195 aaKnown RBP11.01□□□□□ -0.65
SCN10A-201ENST00000449082 GPC4O75487 556 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 NFKBIAP25963 317 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 SFNP31947 248 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 RCAN1P53805 252 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 AIFM3Q96NN9 605 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 JCADQ9P266 1359 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 CLDN3O15551 220 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 NDST4Q9H3R1 872 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 SMYD2Q9NRG4 433 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 BAG5Q9UL15 447 aa11.01□□□□□ -0.65
SCN10A-201ENST00000449082 DYNLT1P63172 113 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 GNGT1P63211 74 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 SNX1Q13596 522 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 IQCB1Q15051 598 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 MFSD14CQ5VZR4 134 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 JADE1Q6IE81 842 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 UNC13DQ70J99 1090 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 BZW1Q7L1Q6 419 aaKnown RBP11□□□□□ -0.65
SCN10A-201ENST00000449082 ERICH1Q86X53 443 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 TBC1D10CQ8IV04 446 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
SCN10A-201ENST00000449082 NCAPGQ9BPX3 1015 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 MTA3Q9BTC8 594 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 ZNF302Q9NR11 478 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 DONSONQ9NYP3 566 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 ALKQ9UM73 1620 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 KPNA2P52292 529 aaKnown RBP11□□□□□ -0.65
SCN10A-201ENST00000449082 EPHB1P54762 984 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 SPP2Q13103 211 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
SCN10A-201ENST00000449082 PIGOQ8TEQ8 1089 aa11□□□□□ -0.65
SCN10A-201ENST00000449082 ATP6V1E2Q96A05 226 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms