RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 GCFC2P16383 781 aaKnown RBP27.09■■□□□ 1.93
C9orf3-207ENST00000445181 DNAJB2P25686 324 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 MARK3P27448 753 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 RETREG2Q8NC44 543 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 CDX2Q99626 313 aaPredicted RBP27.09■■□□□ 1.93
C9orf3-207ENST00000445181 CXXC1Q9P0U4 656 aaPredicted RBP27.09■■□□□ 1.93
C9orf3-207ENST00000445181 SMC3Q9UQE7 1217 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 TMEM265A0A087WTH1 108 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 C17orf102A2RUQ5 167 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 BACH1O14867 736 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 GJB2P29033 226 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 KRT76Q01546 638 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 BFSP2Q13515 415 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 LRCH2Q5VUJ6 765 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 PPP4R3AQ6IN85 833 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 MIS18BP1Q6P0N0 1132 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 SLC17A8Q8NDX2 589 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 VWCEQ96DN2 955 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 TEKT3Q9BXF9 490 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 SAMM50Q9Y512 469 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 EMSYQ7Z589 1322 aa27.08■■□□□ 1.93
C9orf3-207ENST00000445181 PITPNM1O00562 1244 aa27.07■■□□□ 1.92
C9orf3-207ENST00000445181 LGR5O75473 907 aa27.07■■□□□ 1.92
C9orf3-207ENST00000445181 ZNF746Q6NUN9 644 aaPredicted RBP27.07■■□□□ 1.92
C9orf3-207ENST00000445181 DEFB128Q7Z7B8 93 aa27.07■■□□□ 1.92
C9orf3-207ENST00000445181 SLC5A5Q92911 643 aa27.07■■□□□ 1.92
C9orf3-207ENST00000445181 MBOAT7Q96N66 472 aa27.07■■□□□ 1.92
C9orf3-207ENST00000445181 RIT2Q99578 217 aa27.07■■□□□ 1.92
C9orf3-207ENST00000445181 SLC37A4O43826 429 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 MARCH6O60337 910 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 IQCF3P0C7M6 154 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 STAT5BP51692 787 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 FAM160B1Q5W0V3 765 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 ABHD15Q6UXT9 468 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 SMAP1Q8IYB5 467 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-207ENST00000445181 GJA10Q969M2 543 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 TIFAQ96CG3 184 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 PCYT2Q99447 389 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 FOXP1Q9H334 677 aaPredicted RBP27.06■■□□□ 1.92
C9orf3-207ENST00000445181 RNPEPQ9H4A4 650 aa27.06■■□□□ 1.92
C9orf3-207ENST00000445181 CHMP2AO43633 222 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 ATG7O95352 703 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 PFKMP08237 780 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 GNAT1P11488 350 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 PBX2P40425 430 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 ZNF200P98182 395 aaPredicted RBP27.05■■□□□ 1.92
C9orf3-207ENST00000445181 CCDC155Q8N6L0 562 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 ATP6V0A1Q93050 837 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 CTAGE1Q96RT6 745 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 PBX4Q9BYU1 374 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 SETD4Q9NVD3 440 aa27.05■■□□□ 1.92
C9orf3-207ENST00000445181 WDR64B1ANS9 1081 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 PSAPP07602 524 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 RFC2P35250 354 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 SWSAP1Q6NVH7 229 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 PLPPR4Q7Z2D5 763 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 ETNPPLQ8TBG4 499 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 ZNF302Q9NR11 478 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 TRPC6Q9Y210 931 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 PCDHA10Q9Y5I2 948 aa27.04■■□□□ 1.92
C9orf3-207ENST00000445181 H3BQV1 296 aa27.03■■□□□ 1.92
C9orf3-207ENST00000445181 ATP2B1P20020 1258 aa27.03■■□□□ 1.92
C9orf3-207ENST00000445181 PPFIA1Q13136 1202 aa27.03■■□□□ 1.92
C9orf3-207ENST00000445181 CAGE1Q8TC20 777 aa27.03■■□□□ 1.92
C9orf3-207ENST00000445181 MYLIPQ8WY64 445 aa27.03■■□□□ 1.92
C9orf3-207ENST00000445181 TNPO1Q92973 898 aaKnown RBP27.03■■□□□ 1.92
C9orf3-207ENST00000445181 SLC4A7Q9Y6M7 1214 aa27.03■■□□□ 1.92
C9orf3-207ENST00000445181 NRCAMQ92823 1304 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 ZBBXA8MT70 800 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 PSMD10O75832 226 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 JAK3P52333 1124 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 PTK7Q13308 1070 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 CUL4AQ13619 759 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 HIC1Q14526 733 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 PDXDC2PQ6P474 469 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 POTEDQ86YR6 584 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 NOSTRINQ8IVI9 506 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 CCDC60Q8IWA6 550 aaPredicted RBP27.02■■□□□ 1.92
C9orf3-207ENST00000445181 FAM20AQ96MK3 541 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 UNC45AQ9H3U1 944 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 ZNF576Q9H609 170 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 DISC1Q9NRI5 854 aa27.02■■□□□ 1.92
C9orf3-207ENST00000445181 IGKV6D-21A0A0A0MT36 114 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 K7ELQ4 463 aaPredicted RBP27.01■■□□□ 1.91
C9orf3-207ENST00000445181 BAG4O95429 457 aaKnown RBP27.01■■□□□ 1.91
C9orf3-207ENST00000445181 SFNP31947 248 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 SLC26A2P50443 739 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 MCTP1Q6DN14 999 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 CKAP2LQ8IYA6 745 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 AFAP1L1Q8TED9 768 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 LMBR1Q8WVP7 490 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 DHX38Q92620 1227 aaKnown RBP27.01■■□□□ 1.91
C9orf3-207ENST00000445181 FTOQ9C0B1 505 aaKnown RBP eCLIP27.01■■□□□ 1.91
C9orf3-207ENST00000445181 KCNMB3Q9NPA1 279 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 MSRAQ9UJ68 235 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 COL6A3P12111 3177 aa27.01■■□□□ 1.91
C9orf3-207ENST00000445181 TBX3O15119 743 aa27■■□□□ 1.91
C9orf3-207ENST00000445181 TREHO43280 583 aa27■■□□□ 1.91
C9orf3-207ENST00000445181 ACTN1P12814 892 aa27■■□□□ 1.91
C9orf3-207ENST00000445181 HOXC8P31273 242 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms