RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SMAP1Q8IYB5 467 aaPredicted RBP20.38■□□□□ 0.85
CPSF4-205ENST00000440514 ZNF302Q9NR11 478 aa20.38■□□□□ 0.85
CPSF4-205ENST00000440514 WDR81Q562E7 1941 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 WDR64B1ANS9 1081 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 CSF2RAP15509 400 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 BMP8BP34820 402 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 PLCB4Q15147 1175 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 FAM160B1Q5W0V3 765 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 SWSAP1Q6NVH7 229 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 PLPPR4Q7Z2D5 763 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 AFAP1L1Q8TED9 768 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 HAS1Q92839 578 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 ATP6V0A1Q93050 837 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 SCLYQ96I15 445 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 TRPC6Q9Y210 931 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 SAMM50Q9Y512 469 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 PCDHA10Q9Y5I2 948 aa20.37■□□□□ 0.85
CPSF4-205ENST00000440514 SCN5AQ14524 2016 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 IGSF9BQ9UPX0 1349 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 TREHO43280 583 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 PSAPP07602 524 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 PTK7Q13308 1070 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 GRIK4Q16099 956 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 PDXDC2PQ6P474 469 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 B3GNT9Q6UX72 402 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 SERINC5Q86VE9 423 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 TMEM199Q8N511 208 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 DISC1Q9NRI5 854 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 VAV3Q9UKW4 847 aa20.36■□□□□ 0.85
CPSF4-205ENST00000440514 RBAK-RBAKDNI3L0D1 243 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 NEMFO60524 1076 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 JAK3P52333 1124 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 IGBP1P78318 339 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 BFSP2Q13515 415 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 UGCGQ16739 394 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 TRIM71Q2Q1W2 868 aaKnown RBP20.35■□□□□ 0.85
CPSF4-205ENST00000440514 MCTP1Q6DN14 999 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 MIER3Q7Z3K6 550 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 CCDC155Q8N6L0 562 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 SNX21Q969T3 373 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 ZBTB10Q96DT7 871 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 FAM20AQ96MK3 541 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 GABBR1Q9UBS5 961 aa20.35■□□□□ 0.85
CPSF4-205ENST00000440514 NRCAMQ92823 1304 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 TRIOBPQ9H2D6 2365 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 POTEB3A0JP26 581 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 H3BQV1 296 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 PITPNM1O00562 1244 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 TBX3O15119 743 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 MARCH6O60337 910 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 INSRRP14616 1297 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 ATP4AP20648 1035 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 U2AF2P26368 475 aaKnown RBP eCLIP20.34■□□□□ 0.85
CPSF4-205ENST00000440514 SFNP31947 248 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 MCM7P33993 719 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 SLC26A2P50443 739 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 ADAM17P78536 824 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 PPIGQ13427 754 aaKnown RBP eCLIP20.34■□□□□ 0.855e-7■□□□□ 11.3
CPSF4-205ENST00000440514 NBR1Q14596 966 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 HABP4Q5JVS0 413 aaKnown RBP20.34■□□□□ 0.85
CPSF4-205ENST00000440514 C9orf50Q5SZB4 431 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 POTEBQ6S5H4 581 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 TDHQ8IZJ6 230 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 CAGE1Q8TC20 777 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 TRAPPC12Q8WVT3 735 aa20.34■□□□□ 0.85
CPSF4-205ENST00000440514 MYH9P35579 1960 aaKnown RBP20.34■□□□□ 0.85
CPSF4-205ENST00000440514 EML1O00423 815 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 ACRP10323 421 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 GNAT1P11488 350 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 RBL2Q08999 1139 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 CALCRLQ16602 461 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 TTC38Q5R3I4 469 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 MARCH8Q5T0T0 291 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
CPSF4-205ENST00000440514 RUFY4Q6ZNE9 571 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 TRMT1LQ7Z2T5 733 aaKnown RBP20.33■□□□□ 0.85
CPSF4-205ENST00000440514 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 CKAP2LQ8IYA6 745 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 RETREG2Q8NC44 543 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 ATP8B4Q8TF62 1192 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 TMEM60Q9H2L4 133 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 TUBE1Q9UJT0 475 aa20.33■□□□□ 0.85
CPSF4-205ENST00000440514 MAFBQ9Y5Q3 323 aaPredicted RBP20.33■□□□□ 0.85
CPSF4-205ENST00000440514 KAT6AQ92794 2004 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
CPSF4-205ENST00000440514 ZNF862O60290 1169 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 CKBP12277 381 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 SELPP16109 830 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 PRKCEQ02156 737 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 SHHQ15465 462 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 ZNF174Q15697 407 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 LRRC8DQ7L1W4 858 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 C16orf59Q7L2K0 433 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 SLFN12Q8IYM2 578 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 RDM1Q8NG50 284 aa20.32■□□□□ 0.84
CPSF4-205ENST00000440514 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■■■■□ 21.5
CPSF4-205ENST00000440514 IL23AQ9NPF7 189 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms