RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 GJA10Q969M2 543 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 FAM167AQ96KS9 214 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 ZNF302Q9NR11 478 aa27.07■■□□□ 1.92
APOE-202ENST00000425718 POTEFA5A3E0 1075 aa27.06■■□□□ 1.92
APOE-202ENST00000425718 VWA3AA6NCI4 1184 aa27.06■■□□□ 1.92
APOE-202ENST00000425718 F2P00734 622 aa27.06■■□□□ 1.92
APOE-202ENST00000425718 UTP14CQ5TAP6 766 aaKnown RBP27.06■■□□□ 1.92
APOE-202ENST00000425718 KCTD17Q8N5Z5 321 aa27.06■■□□□ 1.92
APOE-202ENST00000425718 SPATA32Q96LK8 384 aa27.06■■□□□ 1.92
APOE-202ENST00000425718 RCOR1Q9UKL0 485 aa27.06■■□□□ 1.92
APOE-202ENST00000425718 H3BRB1 525 aa27.05■■□□□ 1.92
APOE-202ENST00000425718 KRT79Q5XKE5 535 aa27.05■■□□□ 1.92
APOE-202ENST00000425718 NECAB2Q7Z6G3 386 aa27.05■■□□□ 1.92
APOE-202ENST00000425718 VTI1AQ96AJ9 217 aa27.05■■□□□ 1.92
APOE-202ENST00000425718 FTOQ9C0B1 505 aaKnown RBP eCLIP27.05■■□□□ 1.922e-30■□□□□ 9.7
APOE-202ENST00000425718 TUT1Q9H6E5 874 aaKnown RBP27.05■■□□□ 1.92
APOE-202ENST00000425718 TUFT1Q9NNX1 390 aa27.05■■□□□ 1.92
APOE-202ENST00000425718 CCDC85CA6NKD9 419 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 PTGS1P23219 599 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 TXLNAP40222 546 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 QARSP47897 775 aaKnown RBP27.04■■□□□ 1.92
APOE-202ENST00000425718 PSMC5P62195 406 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 SWSAP1Q6NVH7 229 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 PDXDC2PQ6P474 469 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 C16orf70Q9BSU1 422 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 POLR3CQ9BUI4 534 aaPredicted RBP27.04■■□□□ 1.92
APOE-202ENST00000425718 STARD7Q9NQZ5 370 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 MAFBQ9Y5Q3 323 aaPredicted RBP27.04■■□□□ 1.92
APOE-202ENST00000425718 KDM3AQ9Y4C1 1321 aa27.04■■□□□ 1.92
APOE-202ENST00000425718 A0A1W2PQ45 241 aaPredicted RBP27.03■■□□□ 1.92
APOE-202ENST00000425718 A0A1W2PQY0 241 aa27.03■■□□□ 1.92
APOE-202ENST00000425718 POTEMA6NI47 508 aa27.03■■□□□ 1.92
APOE-202ENST00000425718 MARCKSP29966 332 aaPredicted RBP27.03■■□□□ 1.92
APOE-202ENST00000425718 CXCL17Q6UXB2 119 aa27.03■■□□□ 1.92
APOE-202ENST00000425718 ZNF579Q8NAF0 562 aaKnown RBP27.03■■□□□ 1.92
APOE-202ENST00000425718 EIF2AK1Q9BQI3 630 aaKnown RBP27.03■■□□□ 1.92
APOE-202ENST00000425718 ZSWIM4Q9H7M6 989 aa27.03■■□□□ 1.92
APOE-202ENST00000425718 GABBR1Q9UBS5 961 aa27.03■■□□□ 1.92
APOE-202ENST00000425718 IGSF9BQ9UPX0 1349 aa27.03■■□□□ 1.92
APOE-202ENST00000425718 A0A0U1RQG5 324 aaPredicted RBP27.02■■□□□ 1.92
APOE-202ENST00000425718 EML1O00423 815 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 CUTAO60888 179 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 ZNF286BP0CG31 522 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 RPA1P27694 616 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 PSEN2P49810 448 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 PTPN11Q06124 597 aaPredicted RBP27.02■■□□□ 1.92
APOE-202ENST00000425718 MFSD10Q14728 455 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 CCDC60Q8IWA6 550 aaPredicted RBP27.02■■□□□ 1.92
APOE-202ENST00000425718 C11orf49Q9H6J7 331 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 NRBP2Q9NSY0 501 aa27.02■■□□□ 1.92
APOE-202ENST00000425718 FBXO2Q9UK22 296 aaPredicted RBP27.02■■□□□ 1.92
APOE-202ENST00000425718 MROH7Q68CQ1 1323 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 UBA7P41226 1012 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 ME1P48163 572 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 NFRKBQ6P4R8 1299 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 C4orf19Q8IY42 314 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 CKAP2LQ8IYA6 745 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 LEO1Q8WVC0 666 aaPredicted RBP27.01■■□□□ 1.91
APOE-202ENST00000425718 BBXQ8WY36 941 aaPredicted RBP27.01■■□□□ 1.91
APOE-202ENST00000425718 NT5C3AQ9H0P0 336 aa27.01■■□□□ 1.91
APOE-202ENST00000425718 HAS3O00219 553 aa27■■□□□ 1.91
APOE-202ENST00000425718 HBP1O60381 514 aa27■■□□□ 1.91
APOE-202ENST00000425718 GNAT1P11488 350 aa27■■□□□ 1.91
APOE-202ENST00000425718 KIAA0753Q2KHM9 967 aa27■■□□□ 1.91
APOE-202ENST00000425718 SNX29Q8TEQ0 813 aa27■■□□□ 1.91
APOE-202ENST00000425718 CALML4Q96GE6 196 aa27■■□□□ 1.91
APOE-202ENST00000425718 PCYT2Q99447 389 aa27■■□□□ 1.91
APOE-202ENST00000425718 HSD17B14Q9BPX1 270 aa27■■□□□ 1.91
APOE-202ENST00000425718 LXNQ9BS40 222 aa27■■□□□ 1.91
APOE-202ENST00000425718 PPME1Q9Y570 386 aa27■■□□□ 1.91
APOE-202ENST00000425718 LYPLA2O95372 231 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 COL6A1P12109 1028 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 XRCC6P12956 609 aaKnown RBP eCLIP26.99■■□□□ 1.91
APOE-202ENST00000425718 EN2P19622 333 aaPredicted RBP26.99■■□□□ 1.91
APOE-202ENST00000425718 CCT6AP40227 531 aaKnown RBP26.99■■□□□ 1.91
APOE-202ENST00000425718 IRX5P78411 483 aaPredicted RBP26.99■■□□□ 1.91
APOE-202ENST00000425718 IL17AQ16552 155 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 XKR3Q5GH77 459 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 OTUD6AQ7L8S5 288 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 SESTD1Q86VW0 696 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 ATP8B4Q8TF62 1192 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 KAT2BQ92831 832 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 CDK5RAP3Q96JB5 506 aa26.99■■□□□ 1.91
APOE-202ENST00000425718 SENP6Q9GZR1 1112 aaPredicted RBP26.99■■□□□ 1.91
APOE-202ENST00000425718 COL1A2P08123 1366 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 POTEB3A0JP26 581 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 MNX1P50219 401 aaPredicted RBP26.98■■□□□ 1.91
APOE-202ENST00000425718 ITGA7Q13683 1181 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 C1orf53Q5VUE5 145 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 POTEBQ6S5H4 581 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 TPH2Q8IWU9 490 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 C7orf31Q8N865 590 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 DYDC2Q96IM9 177 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 PAWRQ96IZ0 340 aaKnown RBP26.98■■□□□ 1.91
APOE-202ENST00000425718 CCSER1Q9C0I3 900 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 CCDC39Q9UFE4 941 aa26.98■■□□□ 1.91
APOE-202ENST00000425718 RRN3P2A6NIE6 340 aa26.97■■□□□ 1.91
APOE-202ENST00000425718 SLITRK3O94933 977 aa26.97■■□□□ 1.91
APOE-202ENST00000425718 OATP04181 439 aa26.97■■□□□ 1.91
APOE-202ENST00000425718 PRKCEQ02156 737 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms