RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 UHRF1Q96T88 793 aaPredicted RBP11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 MAP3K20Q9NYL2 800 aaKnown RBP11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 PCDHGC3Q9UN70 934 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 COL4A4P53420 1690 aaPredicted RBP11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 MICAL3Q7RTP6 2002 aa11.35□□□□□ -0.59
NIFKP1-201ENST00000398317 PNMA6FA0A0J9YX94 578 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 PPFIA4O75335 1185 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 CXCL10P02778 98 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 HOXD8P13378 290 aaPredicted RBP11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 ANTXR2P58335 489 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 RBL2Q08999 1139 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 TROAPQ12815 778 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 FAM117BQ6P1L5 589 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 KCNV1Q6PIU1 500 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 TRAF7Q6Q0C0 670 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 SAMD3Q8N6K7 520 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 NECAB3Q96P71 396 aaPredicted RBP11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 PRKD2Q9BZL6 878 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 MLXIPQ9HAP2 919 aa11.34□□□□□ -0.59
NIFKP1-201ENST00000398317 SGSM2O43147 1006 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 PARNO95453 639 aaKnown RBP11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 TGFB3P10600 412 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 POU3F3P20264 500 aaPredicted RBP11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 KCNQ1P51787 676 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 MRPS9P82933 396 aaKnown RBP11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 GRB10Q13322 594 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 SART3Q15020 963 aaKnown RBP11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 CATIPQ7Z7H3 387 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 IGDCC4Q8TDY8 1250 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 C16orf70Q9BSU1 422 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 MYL10Q9BUA6 226 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 RTEL1Q9NZ71 1219 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 TELO2Q9Y4R8 837 aa11.33□□□□□ -0.6
NIFKP1-201ENST00000398317 MYO7AQ13402 2215 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 ABHD14A-ACY1A0A1B0GW23 586 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 LPXNO60711 386 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 LGALS2P05162 132 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 BMP1P13497 986 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 THPOP40225 353 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 TRAF1Q13077 416 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 SEMA3FQ13275 785 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 IKBKEQ14164 716 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 CYFIP1Q7L576 1253 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 LY9Q9HBG7 655 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 MTUS1Q9ULD2 1270 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 RBM8AQ9Y5S9 174 aaKnown RBP11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 SIP14410 1827 aa11.32□□□□□ -0.6
NIFKP1-201ENST00000398317 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 RSPH10B2B2RC85 870 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 H3BRB1 525 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 TREHO43280 583 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 LGR5O75473 907 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 GJB5O95377 273 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 RSPH10BP0C881 870 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 SMIM10L2AP0DMW4 78 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 SMIM10L2BP0DMW5 78 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 PLA2G2CQ5R387 149 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 SERINC5Q86VE9 423 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 ZNF654Q8IZM8 581 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 DBF4BQ8NFT6 615 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 RAD9AQ99638 391 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 OSBPL7Q9BZF2 842 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 RNPEPQ9H4A4 650 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
NIFKP1-201ENST00000398317 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 RXRAP19793 462 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 ICAM3P32942 547 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 SP4Q02446 784 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 CSPP1Q1MSJ5 1256 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 UTP14CQ5TAP6 766 aaKnown RBP11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 CASC1Q6TDU7 716 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 METTL7BQ6UX53 244 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 TRIM50Q86XT4 487 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 CMTR1Q8N1G2 835 aaKnown RBP11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 INPP4AQ96PE3 977 aaPredicted RBP11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 GPR20Q99678 358 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 SUGCTQ9HAC7 445 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 RAPGEFL1Q9UHV5 662 aa11.3□□□□□ -0.6
NIFKP1-201ENST00000398317 LINC01553A4QN01 128 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms