RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 ATG3Q9NT62 314 aa18.33■□□□□ 0.52
SREBF1-203ENST00000395751 TRIP13Q15645 432 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-203ENST00000395751 CCT6BQ92526 530 aa18.33■□□□□ 0.52
SREBF1-203ENST00000395751 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
SREBF1-203ENST00000395751 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-203ENST00000395751 TTC4O95801 387 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 PLS3P13797 630 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 CHRNA3P32297 505 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 TFAP4Q01664 338 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.523e-6■■□□□ 13.6
SREBF1-203ENST00000395751 CCDC138Q96M89 665 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 EDEM3Q9BZQ6 932 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 EHD2Q9NZN4 543 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 TMCC1O94876 653 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 CPP00450 1065 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 CAV1Q03135 178 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 SESTD1Q86VW0 696 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 E7ENQ6 273 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 MCF2P10911 925 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 RBM26Q5T8P6 1007 aaKnown RBP18.32■□□□□ 0.52
SREBF1-203ENST00000395751 ISCUQ9H1K1 167 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 NDUFA13Q9P0J0 144 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 EEF1B2P24534 225 aaKnown RBP18.32■□□□□ 0.52
SREBF1-203ENST00000395751 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
SREBF1-203ENST00000395751 DHX34Q14147 1143 aaKnown RBP18.31■□□□□ 0.52
SREBF1-203ENST00000395751 FAM47AQ5JRC9 791 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 RABGAP1LQ5R372 815 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 CRLF3Q8IUI8 442 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 TBC1D23Q9NUY8 699 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 MAN1A2O60476 641 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 STK10O94804 968 aaKnown RBP18.31■□□□□ 0.52
SREBF1-203ENST00000395751 UBTFL6P0CB48 400 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-203ENST00000395751 WDR75Q8IWA0 830 aaKnown RBP18.31■□□□□ 0.52
SREBF1-203ENST00000395751 GJA10Q969M2 543 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 OPTNQ96CV9 577 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 PALMDQ9NP74 551 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 KDM1AO60341 852 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 PLCG1P19174 1290 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 DAB2IPQ5VWQ8 1189 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 KAZNQ674X7 775 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 DPH6Q7L8W6 267 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 PPM1KQ8N3J5 372 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 EPHB1P54762 984 aa18.31■□□□□ 0.52
SREBF1-203ENST00000395751 DMGDHQ9UI17 866 aaKnown RBP18.31■□□□□ 0.52
SREBF1-203ENST00000395751 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 CRCPO75575 148 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 TPP2P29144 1249 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-203ENST00000395751 MAPK4P31152 587 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 PAPD7Q5XG87 772 aaKnown RBP18.3■□□□□ 0.52
SREBF1-203ENST00000395751 SLC26A7Q8TE54 656 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 ZSWIM5Q9P217 1185 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-203ENST00000395751 KCNQ3O43525 872 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 SLC1A4P43007 532 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 LRRC34Q8IZ02 419 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 LZICQ8WZA0 190 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 SDCCAG3Q96C92 435 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 THAP11Q96EK4 314 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 USP17L12C9JPN9 530 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 USP17L21D6R901 530 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 PRPF3O43395 683 aaKnown RBP18.3■□□□□ 0.52
SREBF1-203ENST00000395751 RAD51CO43502 376 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 CENPUQ71F23 418 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 TTC17Q96AE7 1141 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 EIF2AQ9BY44 585 aaKnown RBP18.3■□□□□ 0.52
SREBF1-203ENST00000395751 DDX20Q9UHI6 824 aaKnown RBP18.3■□□□□ 0.52
SREBF1-203ENST00000395751 PCDHA4Q9UN74 947 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 CHMP2BQ9UQN3 213 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
SREBF1-203ENST00000395751 IQANK1A0A1B0GTG1 560 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 GIPC1O14908 333 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 CHMP2AO43633 222 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 HSD17B3P37058 310 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 SKOR1P84550 965 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 DDR1Q08345 913 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 RPS6KA2Q15349 733 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 SMARCAL1Q9NZC9 954 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 TMPRSS15P98073 1019 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 MDM1Q8TC05 714 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 IWS1Q96ST2 819 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 CARD9Q9H257 536 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 ZC4H2Q9NQZ6 224 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-203ENST00000395751 PITPNM2Q9BZ72 1349 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 SGK1O00141 431 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 NCF2P19878 526 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-203ENST00000395751 RFX8Q6ZV50 586 aa18.29■□□□□ 0.52
SREBF1-203ENST00000395751 PIGOQ8TEQ8 1089 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms