RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 HAUS3Q68CZ6 603 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 RSBN1LQ6PCB5 846 aaPredicted RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 TSG101Q99816 390 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 RAB34Q9BZG1 259 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 PSD3Q9NYI0 1048 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 TULP2O00295 520 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 FKBP3Q00688 224 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 CYP4A11Q02928 519 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 KCNA1Q09470 495 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 SEMA3FQ13275 785 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 PRR16Q569H4 304 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 PPP1R18Q6NYC8 613 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 CDAN1Q8IWY9 1227 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 AENQ8WTP8 325 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 KCTD10Q9H3F6 313 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 ADAMTS1Q9UHI8 967 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 AJAP1Q9UKB5 411 aaPredicted RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 TARSL2A2RTX5 802 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 ENTPD3O75355 529 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 PALMO75781 387 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 NDUFB10O96000 172 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 SLC9A1P19634 815 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 HOXA13P31271 388 aaPredicted RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 HOXD13P35453 343 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 MRPL12P52815 198 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 MUM1L1Q5H9M0 696 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 CCDC84Q86UT8 332 aaPredicted RBP14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 DCAF4Q8WV16 495 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 TSGA10Q9BZW7 698 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 VEZTQ9HBM0 779 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 ATRNL1Q5VV63 1379 aa14.86□□□□□ -0.03
GTF2F1-201ENST00000394456 A0A1W2PRG0 241 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 SFI1A8K8P3 1242 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 PPP1R2P41236 205 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 BAG6P46379 1132 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 AARSP49588 968 aaKnown RBP eCLIP14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 TUBB4BP68371 445 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 DNAJC21Q5F1R6 531 aaKnown RBP14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 GOLGA5Q8TBA6 731 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 ANO3Q9BYT9 981 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 TMOD2Q9NZR1 351 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 SCAF8Q9UPN6 1271 aaKnown RBP14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 MEIS2O14770 477 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 MYBP10242 640 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 DLGAP5Q15398 846 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 GJB7Q6PEY0 223 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 CATSPER3Q86XQ3 398 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 TRIM59Q8IWR1 403 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 RTKN2Q8IZC4 609 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 EMILIN3Q9NT22 766 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 HYOU1Q9Y4L1 999 aa14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.85□□□□□ -0.03
GTF2F1-201ENST00000394456 FAM86B1E9PN63 330 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 ZBTB39O15060 712 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 KRT18P05783 430 aaKnown RBP14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 GLI1P08151 1106 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 FAM86B2P0C5J1 330 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 FAM153BP0C7A2 387 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 ECE1P42892 770 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 ORC2Q13416 577 aaPredicted RBP14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 ADAM9Q13443 819 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 FAM153CQ494X1 144 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 SFMBT2Q5VUG0 894 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 MMGT1Q8N4V1 131 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 KCNMB3Q9NPA1 279 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 ZNF70Q9UC06 446 aaPredicted RBP14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 FAM153AQ9UHL3 310 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 A0A0U1RQG5 324 aaPredicted RBP14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 SLC12A3P55017 1021 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 CCDC181Q5TID7 509 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 SFR1Q86XK3 245 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 KSR1Q8IVT5 923 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 C10orf67Q8IYJ2 551 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 OGFOD1Q8N543 542 aa14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 MSL3Q8N5Y2 521 aaKnown RBP14.84□□□□□ -0.03
GTF2F1-201ENST00000394456 CASP4P49662 377 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 SPIRE1Q08AE8 756 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 PSMD2Q13200 908 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 AFAP1L1Q8TED9 768 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 ARL8AQ96BM9 186 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 PSMD1Q99460 953 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 CEP72Q9P209 647 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 PJA2O43164 708 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 VIL1P09327 827 aaKnown RBP14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 SPATA31C1P0DKV0 1188 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 NR2F2P24468 414 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 CARSP49589 748 aaKnown RBP14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 KCNH2Q12809 1159 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 GMLQ99445 158 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 REEP2Q9BRK0 252 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 GANQ9H2C0 597 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 VIPAS39Q9H9C1 493 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms