RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 MYH7BA7E2Y1 1941 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 SCP2P22307 547 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 CDR1P51861 262 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 MRPS25P82663 173 aaKnown RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 HDLBPQ00341 1268 aaKnown RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 IFT88Q13099 833 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 ECM1Q16610 540 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 FIGNQ5HY92 759 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 NFRKBQ6P4R8 1299 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 HAS1Q92839 578 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 ATP6V1G3Q96LB4 118 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC42Q96M95 316 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 MYO3BQ8WXR4 1341 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 HMGB1P1B2RPK0 211 aaPredicted RBP16.49■□□□□ 0.23
SHTN1-204ENST00000392903 ERCC3P19447 782 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 CCNE1P24864 410 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 PAFAH1B1P43034 410 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 CLK2P49760 499 aaKnown RBP16.49■□□□□ 0.23
SHTN1-204ENST00000392903 KLK7P49862 253 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 SATB1Q01826 763 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 PPP4R3AQ6IN85 833 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC50Q8IVM0 306 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 C3orf20Q8ND61 904 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 FLAD1Q8NFF5 587 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 DHX36Q9H2U1 1008 aaKnown RBP16.49■□□□□ 0.23
SHTN1-204ENST00000392903 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 GCFC2P16383 781 aaKnown RBP16.49■□□□□ 0.23
SHTN1-204ENST00000392903 PAK2Q13177 524 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 ORC2Q13416 577 aaPredicted RBP16.49■□□□□ 0.23
SHTN1-204ENST00000392903 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 SIAH1Q8IUQ4 282 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 ALS2CR12Q96Q35 445 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
SHTN1-204ENST00000392903 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
SHTN1-204ENST00000392903 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 HNRNPH3P31942 346 aaKnown RBP16.48■□□□□ 0.23
SHTN1-204ENST00000392903 SEC24CP53992 1094 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 ITGB3BPQ13352 177 aaPredicted RBP16.48■□□□□ 0.23
SHTN1-204ENST00000392903 PDIA5Q14554 519 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 SNCBQ16143 134 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 CNOT6LQ96LI5 555 aaKnown RBP16.48■□□□□ 0.23
SHTN1-204ENST00000392903 KANSL2Q9H9L4 492 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 MLXIPQ9HAP2 919 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 RBM12Q9NTZ6 932 aaKnown RBP16.48■□□□□ 0.23
SHTN1-204ENST00000392903 PCDHA12Q9UN75 941 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 UTRNP46939 3433 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 BICDL2A1A5D9 508 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 MOCS3O95396 460 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 LCA5LO95447 670 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 HMGB2P26583 209 aaKnown RBP16.48■□□□□ 0.23
SHTN1-204ENST00000392903 MTIF2P46199 727 aaKnown RBP16.48■□□□□ 0.23
SHTN1-204ENST00000392903 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 KRT26Q7Z3Y9 468 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 PARP9Q8IXQ6 854 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 GLIS3Q8NEA6 775 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
SHTN1-204ENST00000392903 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 FAM153BP0C7A2 387 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 TAL1P17542 331 aaPredicted RBP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 CARSP49589 748 aaKnown RBP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 ICA1Q05084 483 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 LRRC41Q15345 812 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 CDC37Q16543 378 aaPredicted RBP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 FAM153CQ494X1 144 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 PPP1R18Q6NYC8 613 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 RAD54LQ92698 747 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 DDX12PQ92771 950 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 MTMR8Q96EF0 704 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 CYFIP2Q96F07 1278 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 SMARCAL1Q9NZC9 954 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 RNF14Q9UBS8 474 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 FAM153AQ9UHL3 310 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 NFU1Q9UMS0 254 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 F5H6K3 240 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 GLI1P08151 1106 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 CXCR5P32302 372 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 JAG1P78504 1218 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 KLRC3Q07444 240 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 USH1GQ495M9 461 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 CYB5D1Q6P9G0 228 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 FAM212AQ96EL1 285 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC114Q96M63 670 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 NOC4LQ9BVI4 516 aaKnown RBP16.47■□□□□ 0.23
SHTN1-204ENST00000392903 IDI2Q9BXS1 227 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
SHTN1-204ENST00000392903 STK17AQ9UEE5 414 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms