RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 SH3BGRP55822 239 aaPredicted RBP20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 RASGRF1Q13972 1273 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 FGD4Q96M96 766 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 NDST4Q9H3R1 872 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 K7ERI5 159 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 GDAP1Q8TB36 358 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 SLMAPQ14BN4 828 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 KRT27Q7Z3Y8 459 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 FOXP4Q8IVH2 680 aaPredicted RBP20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 WDR64B1ANS9 1081 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 RXRBP28702 533 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 LIFRP42702 1097 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 TSPYL2Q9H2G4 693 aaPredicted RBP20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 FAM8A1Q9UBU6 413 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 CIAPIN1Q6FI81 312 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 DSTYKQ6XUX3 929 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 GSTA4O15217 222 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 LMCD1Q9NZU5 365 aa20.48■□□□□ 0.87
TBC1D4-201ENST00000377625 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ZNF18P17022 549 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 LRRC63Q05C16 580 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ORC6Q9Y5N6 252 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 CTNND1O60716 968 aaKnown RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 LUC7L3O95232 432 aaKnown RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 NPR1P16066 1061 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 GCKP35557 465 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ARL13BQ3SXY8 428 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 BBS9Q3SYG4 887 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 RASIP1Q5U651 963 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ZNF341Q9BYN7 854 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 BHMT2Q9H2M3 363 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 EXOC1LA0A1B0GW35 172 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 SLFN12LQ6IEE8 588 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 VSTM4Q8IW00 320 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 DEPDC1BQ8WUY9 529 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ABCF3Q9NUQ8 709 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 NDUFA10O95299 355 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ZNF772Q68DY9 489 aaPredicted RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 AIFM3Q96NN9 605 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 MRPL46Q9H2W6 279 aaKnown RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 TTI1O43156 1089 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ATP8B1O43520 1251 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 ZBED1O96006 694 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 DALRD3Q5D0E6 543 aaKnown RBP20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 COA1Q9GZY4 146 aa20.47■□□□□ 0.87
TBC1D4-201ENST00000377625 CFAP65Q6ZU64 1925 aaKnown RBP20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 DR1Q01658 176 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 RSBN1LQ6PCB5 846 aaPredicted RBP20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 METP08581 1390 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 ARL6IP4Q66PJ3 421 aaKnown RBP20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 RNF207Q6ZRF8 634 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 PEX3P56589 373 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 CUL4AQ13619 759 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 ERICH1Q86X53 443 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 ELF1P32519 619 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 PDCD7Q8N8D1 485 aaKnown RBP20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 GPR101Q96P66 508 aaPredicted RBP20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 SLC8A2Q9UPR5 921 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 SOX5P35711 763 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 CYP27A1Q02318 531 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 CDO1Q16878 200 aa20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 FAM49AQ9H0Q0 323 aaPredicted RBP20.46■□□□□ 0.87
TBC1D4-201ENST00000377625 HP1BP3Q5SSJ5 553 aaPredicted RBP20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 PSPC1Q8WXF1 523 aaKnown RBP20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 AP1M1Q9BXS5 423 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 ZWILCHQ9H900 591 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 FAF1Q9UNN5 650 aaPredicted RBP20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 BNIP3LO60238 219 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 PMLP29590 882 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 OR6B3Q8NGW1 331 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 RASGRF2O14827 1237 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 PLEKHA8P1O95397 391 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 RESTQ13127 1097 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 TMEM179Q6ZVK1 233 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 NEK9Q8TD19 979 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 SLC10A4Q96EP9 437 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 IRAK4Q9NWZ3 460 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 RTKN2Q8IZC4 609 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 HSPH1Q92598 858 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 SFI1A8K8P3 1242 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 CD2BP2O95400 341 aaKnown RBP20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 GCNAQ96QF7 691 aa20.45■□□□□ 0.86
TBC1D4-201ENST00000377625 MYCP01106 439 aaPredicted RBP20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 EFHD1Q9BUP0 239 aa20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 PIGBQ92521 554 aa20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 CNOT10Q9H9A5 744 aaKnown RBP20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 TPX2Q9ULW0 747 aaKnown RBP20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 KDM5DQ9BY66 1539 aa20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 CDR2Q01850 454 aa20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 NNTQ13423 1086 aa20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 CXorf38Q8TB03 319 aa20.44■□□□□ 0.86
TBC1D4-201ENST00000377625 G3BP2Q9UN86 482 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms