RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 NCK2O43639 380 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 NAP1L1P55209 391 aaKnown RBP18.4■□□□□ 0.54
HDAC8-206ENST00000373571 ITIH3Q06033 890 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 KNOP1Q1ED39 458 aaKnown RBP18.4■□□□□ 0.54
HDAC8-206ENST00000373571 STYK1Q6J9G0 422 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 BTNL9Q6UXG8 535 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 MED4Q9NPJ6 270 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 LUC7LQ9NQ29 371 aaKnown RBP18.4■□□□□ 0.54
HDAC8-206ENST00000373571 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 VAV3Q9UKW4 847 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 TRAF3IP3Q9Y228 551 aa18.4■□□□□ 0.54
HDAC8-206ENST00000373571 ENTPD3O75355 529 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 CXCR5P32302 372 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 ZNF76P36508 570 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 CYP4A11Q02928 519 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 AOC3Q16853 763 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 CCDC181Q5TID7 509 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 CCNI2Q6ZMN8 369 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-206ENST00000373571 GSPT2Q8IYD1 628 aaKnown RBP18.39■□□□□ 0.53
HDAC8-206ENST00000373571 SPICE1Q8N0Z3 855 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 SPATA4Q8NEY3 305 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 GANQ9H2C0 597 aa18.39■□□□□ 0.53
HDAC8-206ENST00000373571 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 PLSCR1O15162 318 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 MYBP10242 640 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 MYBL2P10244 700 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 LMAN1P49257 510 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 ARID5AQ03989 594 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 RRP1BQ14684 758 aaKnown RBP18.38■□□□□ 0.53
HDAC8-206ENST00000373571 KLHDC7AQ5VTJ3 777 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 EPM2AIP1Q7L775 607 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-206ENST00000373571 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 FAM133AQ8N9E0 248 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 CYP2W1Q8TAV3 490 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 CSRNP1Q96S65 589 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 CALCOCO1Q9P1Z2 691 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 PRR12Q9ULL5 1215 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 HPCAL4Q9UM19 191 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 CALUO43852 315 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-206ENST00000373571 PRPF6O94906 941 aaKnown RBP18.38■□□□□ 0.53
HDAC8-206ENST00000373571 APBA3O96018 575 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 HOXD13P35453 343 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 KLHL30Q0D2K2 578 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 ASIC2Q16515 512 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDAC8-206ENST00000373571 TLR10Q9BXR5 811 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 AIPL1Q9NZN9 384 aa18.38■□□□□ 0.53
HDAC8-206ENST00000373571 ARMCX3Q9UH62 379 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-206ENST00000373571 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 PHACTR2O75167 634 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 CYP3A4P08684 503 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 PRMT6Q96LA8 375 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 GDAP1L1Q96MZ0 367 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 EIF2AK1Q9BQI3 630 aaKnown RBP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 LRRC1Q9BTT6 524 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 POLR3CQ9BUI4 534 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 SMARCAL1Q9NZC9 954 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 EHD2Q9NZN4 543 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 PIK3CDO00329 1044 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 PDXKO00764 312 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 PAFAH1B1P43034 410 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 MATR3P43243 847 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 AARSP49588 968 aaKnown RBP eCLIP18.37■□□□□ 0.533e-6■■■■■ 61.8
HDAC8-206ENST00000373571 EZH2Q15910 746 aaKnown RBP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 ENOX2Q16206 610 aaKnown RBP18.37■□□□□ 0.53
HDAC8-206ENST00000373571 SELENOOQ9BVL4 669 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 RABGAP1Q9Y3P9 1069 aa18.37■□□□□ 0.53
HDAC8-206ENST00000373571 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 A0A087X0T9 212 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 EML1O00423 815 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 TBCAO75347 108 aaKnown RBP18.36■□□□□ 0.53
HDAC8-206ENST00000373571 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
HDAC8-206ENST00000373571 FAM228BP0C875 321 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 ACTN1P12814 892 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 HNRNPH2P55795 449 aaKnown RBP18.36■□□□□ 0.53
HDAC8-206ENST00000373571 NAB2Q15742 525 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 RGL1Q9NZL6 768 aa18.36■□□□□ 0.53
HDAC8-206ENST00000373571 COL2A1P02458 1487 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-206ENST00000373571 GCNT3O95395 438 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 EYA4O95677 639 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
HDAC8-206ENST00000373571 SLC9A1P19634 815 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 KLRC1P26715 233 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 CHRNA5P30532 468 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 STAT2P52630 851 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 BMT2Q1RMZ1 405 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 HDAC7Q8WUI4 952 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 RUBCNQ92622 972 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 HINFPQ9BQA5 517 aa18.35■□□□□ 0.53
HDAC8-206ENST00000373571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDAC8-206ENST00000373571 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
HDAC8-206ENST00000373571 ADAMTS1Q9UHI8 967 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms