RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 MIER3Q7Z3K6 550 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 GPRC5AQ8NFJ5 357 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 CACTINQ8WUQ7 758 aaKnown RBP12.35□□□□□ -0.43
VANGL1-203ENST00000369509 CDHR1Q96JP9 859 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 MMP19Q99542 508 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 FANCLQ9NW38 375 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
VANGL1-203ENST00000369509 CTNND2Q9UQB3 1225 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 NFE2L3Q9Y4A8 694 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 DOCK3Q8IZD9 2030 aa12.35□□□□□ -0.43
VANGL1-203ENST00000369509 KIF3CO14782 793 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 PGK2P07205 417 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 KRT76Q01546 638 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 GNPTABQ3T906 1256 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 ANKRD13CQ8N6S4 541 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 BANK1Q8NDB2 785 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 RWDD2AQ9UIY3 292 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 ZBTB39O15060 712 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 NRDCO43847 1150 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 JAK3P52333 1124 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 COASYQ13057 564 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 PAK1Q13153 545 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 KCTD2Q14681 263 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 SPATA1Q5VX52 437 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 ZNF746Q6NUN9 644 aaPredicted RBP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 PIGOQ8TEQ8 1089 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 CCDC47Q96A33 483 aaKnown RBP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
VANGL1-203ENST00000369509 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
VANGL1-203ENST00000369509 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 LYPLA2O95372 231 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 SLC10A3P09131 477 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 SFNP31947 248 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 STX17P56962 302 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 CCNA1P78396 465 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 SP2Q02086 613 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 CDKAL1Q5VV42 579 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 RDM1Q8NG50 284 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 NELFBQ8WX92 580 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 RUSC1Q9BVN2 902 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 PCDHA2Q9Y5H9 948 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 TNNT1P13805 278 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 IDEP14735 1019 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 PSMD2Q13200 908 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 GIT2Q14161 759 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 UGCGQ16739 394 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 NACC1Q96RE7 527 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 REEP2Q9BRK0 252 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 GPBP1L1Q9HC44 474 aaPredicted RBP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 SAMSN1Q9NSI8 373 aaKnown RBP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
VANGL1-203ENST00000369509 TELO2Q9Y4R8 837 aa12.33□□□□□ -0.44
VANGL1-203ENST00000369509 MGAMO43451 1857 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 LOC102724159A0A0B4J2E5 919 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 MANSC4A6NHS7 340 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 FAM155AB1AL88 458 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 SKILP12757 684 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 QARSP47897 775 aaKnown RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 FANCCQ00597 558 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 PWP2Q15269 919 aaKnown RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 TTI2Q6NXR4 508 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 C1orf186Q6ZWK4 172 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 GLIS3Q8NEA6 775 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 DHTKD1Q96HY7 919 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 C16orf45Q96MC5 204 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
VANGL1-203ENST00000369509 PANK4Q9NVE7 773 aa12.32□□□□□ -0.44
VANGL1-203ENST00000369509 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
VANGL1-203ENST00000369509 PSMA7O14818 248 aa12.31□□□□□ -0.44
VANGL1-203ENST00000369509 CBFA2T2O43439 604 aa12.31□□□□□ -0.44
VANGL1-203ENST00000369509 COBLO75128 1261 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms