RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 HDAC9Q9UKV0 1011 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 PPFIA4O75335 1185 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 CXCR5P32302 372 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 CIITAP33076 1130 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 SREBF1P36956 1147 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 PAK2Q13177 524 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 SRLQ86TD4 932 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 CATSPER3Q86XQ3 398 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.7■□□□□ 0.1
CD48-201ENST00000368045 TMX4Q9H1E5 349 aaPredicted RBP15.7■□□□□ 0.1
CD48-201ENST00000368045 DNAJC18Q9H819 358 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 GDF3Q9NR23 364 aa15.7■□□□□ 0.1
CD48-201ENST00000368045 MYH7BA7E2Y1 1941 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 G3V3G9 751 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 HSF2BPO75031 334 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 POTEIP0CG38 1075 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 ERCC3P19447 782 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
CD48-201ENST00000368045 ALDH1B1P30837 517 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 STAT3P40763 770 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 MATR3P43243 847 aaKnown RBP eCLIP15.69■□□□□ 0.1
CD48-201ENST00000368045 NFIAQ12857 509 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 KIAA0753Q2KHM9 967 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 POTEGQ6S5H5 508 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 POTEEQ6S8J3 1075 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 EIF1ADQ8N9N8 165 aaKnown RBP15.69■□□□□ 0.1
CD48-201ENST00000368045 GDAP1L1Q96MZ0 367 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 POLR3CQ9BUI4 534 aaPredicted RBP15.69■□□□□ 0.1
CD48-201ENST00000368045 RRP15Q9Y3B9 282 aaKnown RBP15.69■□□□□ 0.1
CD48-201ENST00000368045 ATAD5Q96QE3 1844 aa15.69■□□□□ 0.1
CD48-201ENST00000368045 A0A087X0T9 212 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 FAM228BP0C875 321 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 SPATA31C1P0DKV0 1188 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 GAP43P17677 238 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 KLRC1P26715 233 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 PRKCIP41743 596 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 PRR16Q569H4 304 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 DPY19L2P1Q6NXN4 242 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 PODNQ7Z5L7 613 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 FBXO11Q86XK2 927 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 MREGQ8N565 214 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 FAM133AQ8N9E0 248 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 TAF4BQ92750 862 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
CD48-201ENST00000368045 RUFY1Q96T51 708 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 PSMB7Q99436 277 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.68■□□□□ 0.1
CD48-201ENST00000368045 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
CD48-201ENST00000368045 SYNPO2Q9UMS6 1093 aa15.68■□□□□ 0.1
CD48-201ENST00000368045 SPDYE3A6NKU9 549 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 CYP3A4P08684 503 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 TNNC1P63316 161 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 SLC7A5Q01650 507 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
CD48-201ENST00000368045 ICA1Q05084 483 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 TRAF1Q13077 416 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 EXOC3L4Q17RC7 722 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 DOK7Q18PE1 504 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 IRF2BP2Q7Z5L9 587 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 SEPT12Q8IYM1 358 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 RIN2Q8WYP3 895 aaPredicted RBP15.67■□□□□ 0.1
CD48-201ENST00000368045 LENG9Q96B70 501 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 PBKQ96KB5 322 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 SPAG5Q96R06 1193 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 REEP2Q9BRK0 252 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 ZHX3Q9H4I2 956 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 ADAMTS1Q9UHI8 967 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 FEZ2Q9UHY8 353 aaPredicted RBP15.67■□□□□ 0.1
CD48-201ENST00000368045 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 MYH4Q9Y623 1939 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 GTPBP10A4D1E9 387 aaKnown RBP15.67■□□□□ 0.1
CD48-201ENST00000368045 UBAP1LF5GYI3 381 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 MYO1CO00159 1063 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 GFPT2O94808 682 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 EYA4O95677 639 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 FTCDO95954 541 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 XRCC5P13010 732 aaKnown RBP15.67■□□□□ 0.1
CD48-201ENST00000368045 UCHL3P15374 230 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 NFIL3Q16649 462 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 BTNL9Q6UXG8 535 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 SMARCAL1Q9NZC9 954 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 INTUQ9ULD6 942 aa15.67■□□□□ 0.1
CD48-201ENST00000368045 TBCAO75347 108 aaKnown RBP15.66■□□□□ 0.1
CD48-201ENST00000368045 HEXIM1O94992 359 aaKnown RBP15.66■□□□□ 0.1
CD48-201ENST00000368045 CASP5P51878 434 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 PABPC4Q13310 644 aaKnown RBP eCLIP15.66■□□□□ 0.1
CD48-201ENST00000368045 EPHA7Q15375 998 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 VPS36Q86VN1 386 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 GPIHBP1Q8IV16 184 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 ZFPM1Q8IX07 1006 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 WHAMMQ8TF30 809 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 MS4A14Q96JA4 679 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms