RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 TMEM154Q6P9G4 183 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 FITM2Q8N6M3 262 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 C4orf32Q8N8J7 132 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 ATL2Q8NHH9 583 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
CD46-203ENST00000354848 GOLPH3Q9H4A6 298 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 NLRC4Q9NPP4 1024 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 PCMTD2Q9NV79 361 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 CCDC188H7C350 402 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 PGRMC1O00264 195 aaKnown RBP8.56□□□□□ -1.04
CD46-203ENST00000354848 KRIT1O00522 736 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 ADAMTS3O15072 1205 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 NUDT17P0C025 328 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 ITGA4P13612 1032 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 GBP1P32455 592 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 KLC1Q07866 573 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 MAN2A1Q16706 1144 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 CMPK2Q5EBM0 449 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
CD46-203ENST00000354848 SLC17A8Q8NDX2 589 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 FBF1Q8TES7 1133 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 FMO2Q99518 471 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 MTA3Q9BTC8 594 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 SEMA6BQ9H3T3 888 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 AZI2Q9H6S1 392 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 FAM114A2Q9NRY5 505 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 NUP188Q5SRE5 1749 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 PHRF1Q9P1Y6 1649 aaKnown RBP8.56□□□□□ -1.04
CD46-203ENST00000354848 CCDC88AQ3V6T2 1871 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 SMIM23A6NLE4 172 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 SUN1O94901 812 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 SERPING1P05155 500 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 CALB2P22676 271 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 RFC5P40937 340 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 USP11P51784 963 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 RAD23BP54727 409 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 POLE2P56282 527 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 PPP2R5BQ15173 497 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 SLC18A3Q16572 532 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 PTPROQ16827 1216 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 LRRC23Q53EV4 343 aaPredicted RBP8.56□□□□□ -1.04
CD46-203ENST00000354848 TBC1D5Q92609 795 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 UTP4Q969X6 686 aaKnown RBP8.56□□□□□ -1.04
CD46-203ENST00000354848 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.046e-6■■□□□ 11.7
CD46-203ENST00000354848 RNPEPL1Q9HAU8 725 aa8.56□□□□□ -1.04
CD46-203ENST00000354848 TNKSO95271 1327 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 A0A087X0T9 212 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 GSG1L2A8MUP6 293 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 RGS16O15492 202 aaPredicted RBP8.55□□□□□ -1.04
CD46-203ENST00000354848 MBD4O95243 580 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 FAM228BP0C875 321 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 ZBTB48P10074 688 aaPredicted RBP8.55□□□□□ -1.04
CD46-203ENST00000354848 LTKP29376 864 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 SEC23AQ15436 765 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 TBC1D16Q8TBP0 767 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 BICD1Q96G01 975 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
CD46-203ENST00000354848 TRIM31Q9BZY9 425 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 SLITRK6Q9H5Y7 841 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 ARMT1Q9H993 441 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 FGFR1OP2Q9NVK5 253 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 DLGAP2Q9P1A6 1054 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 UTP11Q9Y3A2 253 aaKnown RBP8.55□□□□□ -1.04
CD46-203ENST00000354848 CCDC169A6NNP5 214 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 E7ENQ6 273 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 PRKAB2O43741 272 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 PEX11AO75192 247 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 TPBGLP0DKB5 382 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 CCNB1P14635 433 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 UBA7P41226 1012 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 PEX5P50542 639 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 KCNMA1Q12791 1236 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 HHATQ5VTY9 493 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 SFMBT2Q5VUG0 894 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 APBB1IPQ7Z5R6 666 aaPredicted RBP8.55□□□□□ -1.04
CD46-203ENST00000354848 METTL13Q8N6R0 699 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 ATP8B4Q8TF62 1192 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 KIFAP3Q92845 792 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 HPS3Q969F9 1004 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 IFT43Q96FT9 208 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.55□□□□□ -1.04
CD46-203ENST00000354848 EDEM3Q9BZQ6 932 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 PABPC3Q9H361 631 aaKnown RBP8.55□□□□□ -1.04
CD46-203ENST00000354848 RXFP1Q9HBX9 757 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 MYH3P11055 1940 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 BCL9O00512 1426 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 RTL9Q8NET4 1388 aa8.55□□□□□ -1.04
CD46-203ENST00000354848 O00370 1275 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 GJB6O95452 261 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 AGTP01019 485 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 GNAQP50148 359 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 CNGA2Q16280 664 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 OR52E8Q6IFG1 317 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 CENPPQ6IPU0 288 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
CD46-203ENST00000354848 KIAA0895Q8NCT3 520 aa8.54□□□□□ -1.04
CD46-203ENST00000354848 PHC3Q8NDX5 983 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms