RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 CDY2AQ9Y6F7 541 aa20.54■□□□□ 0.88
MUC1-204ENST00000343256 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 NRCAMQ92823 1304 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 TSHZ1Q6ZSZ6 1077 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 FRMD5Q7Z6J6 570 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 CRIPAKQ8N1N5 446 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 EVI5LQ96CN4 794 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 NEK1Q96PY6 1258 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 RTEL1Q9NZ71 1219 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 PCDHA1Q9Y5I3 950 aa20.53■□□□□ 0.88
MUC1-204ENST00000343256 PCP11498 1178 aaKnown RBP20.52■□□□□ 0.88
MUC1-204ENST00000343256 MRPS9P82933 396 aaKnown RBP20.52■□□□□ 0.88
MUC1-204ENST00000343256 NEDD9Q14511 834 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 TAF2Q6P1X5 1199 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 NPAS4Q8IUM7 802 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 ADSSL1Q8N142 457 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 KREMEN2Q8NCW0 462 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 ZBTB10Q96DT7 871 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 SMOC2Q9H3U7 446 aa20.52■□□□□ 0.88
MUC1-204ENST00000343256 RNF41Q9H4P4 317 aaPredicted RBP20.52■□□□□ 0.88
MUC1-204ENST00000343256 MAP3K20Q9NYL2 800 aaKnown RBP20.52■□□□□ 0.88
MUC1-204ENST00000343256 GCOM1H8Y6P7 765 aaPredicted RBP20.51■□□□□ 0.87
MUC1-204ENST00000343256 POLR2MP0CAP2 368 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 NMIQ13287 307 aaPredicted RBP20.51■□□□□ 0.87
MUC1-204ENST00000343256 DUSP6Q16828 381 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 RSPH3Q86UC2 560 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 IQCA1Q86XH1 822 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
MUC1-204ENST00000343256 NKD2Q969F2 451 aaPredicted RBP20.51■□□□□ 0.87
MUC1-204ENST00000343256 S1PR5Q9H228 398 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 TSHZ2Q9NRE2 1034 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 CDH22Q9UJ99 828 aa20.51■□□□□ 0.87
MUC1-204ENST00000343256 SPATA31C2B4DYI2 1134 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 B4E1Z4 1266 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 BRD1O95696 1058 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 MARK3P27448 753 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 TECP42680 631 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 ERVFC1P60507 584 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 PPFIA1Q13136 1202 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 HOMER1Q86YM7 354 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 ZSCAN10Q96SZ4 725 aaPredicted RBP20.5■□□□□ 0.87
MUC1-204ENST00000343256 TUBE1Q9UJT0 475 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
MUC1-204ENST00000343256 MYO10Q9HD67 2058 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 ZBTB5O15062 677 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 GRIK4Q16099 956 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 SPOUT1Q5T280 376 aaKnown RBP20.49■□□□□ 0.87
MUC1-204ENST00000343256 ANKRD54Q6NXT1 300 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 LLGL2Q6P1M3 1020 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 SYCE2Q6PIF2 218 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 MTMR8Q96EF0 704 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 INPP4AQ96PE3 977 aaPredicted RBP20.49■□□□□ 0.87
MUC1-204ENST00000343256 HCSTQ9UBK5 93 aa20.49■□□□□ 0.87
MUC1-204ENST00000343256 VPS13AQ96RL7 3174 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 STAG3L1P0CL83 205 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 SCG2P13521 617 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 IGBP1P78318 339 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 MRPS6P82932 125 aaKnown RBP20.48■□□□□ 0.87
MUC1-204ENST00000343256 TMEM62Q0P6H9 643 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 CCDC178Q5BJE1 867 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 MARCH8Q5T0T0 291 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 SAMD3Q8N6K7 520 aa20.48■□□□□ 0.87
MUC1-204ENST00000343256 FAM49AQ9H0Q0 323 aaPredicted RBP20.48■□□□□ 0.87
MUC1-204ENST00000343256 GVINP1Q7Z2Y8 2422 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 LOXHD1Q8IVV2 1947 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 KLRF2D3W0D1 207 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 ZNF213O14771 459 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 FIBPO43427 364 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 TCF7P36402 384 aaPredicted RBP20.47■□□□□ 0.87
MUC1-204ENST00000343256 APOBRQ0VD83 1088 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 MTMR3Q13615 1198 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 PLPP4Q5VZY2 271 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 CDCA3Q99618 268 aaPredicted RBP20.47■□□□□ 0.87
MUC1-204ENST00000343256 FTHL17Q9BXU8 183 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 LRFN2Q9ULH4 789 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 PADI3Q9ULW8 664 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 SORCS3Q9UPU3 1222 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 PCDHB12Q9Y5F1 795 aa20.47■□□□□ 0.87
MUC1-204ENST00000343256 MED19A0JLT2 244 aaPredicted RBP20.46■□□□□ 0.87
MUC1-204ENST00000343256 MBLAC1A4D2B0 266 aaPredicted RBP20.46■□□□□ 0.87
MUC1-204ENST00000343256 FGF18O76093 207 aa20.46■□□□□ 0.87
MUC1-204ENST00000343256 KCNC3Q14003 757 aa20.46■□□□□ 0.87
MUC1-204ENST00000343256 SLC35G1Q2M3R5 365 aa20.46■□□□□ 0.87
MUC1-204ENST00000343256 TMEM260Q9NX78 707 aa20.46■□□□□ 0.87
MUC1-204ENST00000343256 ZSWIM5Q9P217 1185 aa20.46■□□□□ 0.87
MUC1-204ENST00000343256 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
MUC1-204ENST00000343256 BAZ2BQ9UIF8 2168 aaKnown RBP20.45■□□□□ 0.86
MUC1-204ENST00000343256 C2CD4DB7Z1M9 353 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 FSCN2O14926 492 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 UBE3AQ05086 875 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 ASTLQ6HA08 431 aaPredicted RBP20.45■□□□□ 0.86
MUC1-204ENST00000343256 UBALD2Q8IYN6 164 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 THNSL1Q8IYQ7 743 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 PIGSQ96S52 555 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 TMX1Q9H3N1 280 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 MAD2L2Q9UI95 211 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 FRMPD4Q14CM0 1322 aa20.45■□□□□ 0.86
MUC1-204ENST00000343256 LAMA4Q16363 1823 aa20.44■□□□□ 0.86
MUC1-204ENST00000343256 FNDC1Q4ZHG4 1894 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms