RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 TAB3Q8N5C8 712 aaPredicted RBP17.83■□□□□ 0.45
RDX-201ENST00000343115 SH2D3CQ8N5H7 860 aa17.83■□□□□ 0.44
RDX-201ENST00000343115 IFT74Q96LB3 600 aa17.83■□□□□ 0.44
RDX-201ENST00000343115 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.83■□□□□ 0.44
RDX-201ENST00000343115 BCL9O00512 1426 aa17.83■□□□□ 0.44
RDX-201ENST00000343115 SASH3O75995 380 aa17.83■□□□□ 0.44
RDX-201ENST00000343115 PDXDC1Q6P996 788 aa17.83■□□□□ 0.44
RDX-201ENST00000343115 NLRX1Q86UT6 975 aa17.83■□□□□ 0.44
RDX-201ENST00000343115 STMN4Q9H169 189 aaPredicted RBP17.83■□□□□ 0.44
RDX-201ENST00000343115 FGGP02679 453 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 ZNF211Q13398 564 aaPredicted RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 MTMR3Q13615 1198 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 UAP1Q16222 522 aaPredicted RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 NT5DC1Q5TFE4 455 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.82■□□□□ 0.44
RDX-201ENST00000343115 STK24Q9Y6E0 443 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 IKBKGQ9Y6K9 419 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 PDS5AQ29RF7 1337 aaKnown RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 PALM3A6NDB9 673 aaPredicted RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 TRIM66O15016 1216 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 IFNB1P01574 187 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 SNX1Q13596 522 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 GRIK5Q16478 980 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 DHX36Q9H2U1 1008 aaKnown RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 BEND6Q5SZJ8 279 aaPredicted RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 ZNF746Q6NUN9 644 aaPredicted RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 C16orf86Q6ZW13 317 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 DAAM1Q9Y4D1 1078 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 TACC3Q9Y6A5 838 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 CYTH3O43739 400 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 EMBQ6PCB8 327 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 PROM2Q8N271 834 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 DNAJC17Q9NVM6 304 aaKnown RBP17.82■□□□□ 0.44
RDX-201ENST00000343115 KBTBD4Q9NVX7 518 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 DNAJC12Q9UKB3 198 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 CAPN6Q9Y6Q1 641 aa17.82■□□□□ 0.44
RDX-201ENST00000343115 H3BQF6 201 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 DNAAF5Q86Y56 855 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 JMJD4Q9H9V9 463 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 NOVA2Q9UNW9 492 aaKnown RBP17.81■□□□□ 0.44
RDX-201ENST00000343115 EXOC7Q9UPT5 735 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 EIF2AK2P19525 551 aaKnown RBP17.81■□□□□ 0.44
RDX-201ENST00000343115 SLC9A1P19634 815 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 KNOP1Q1ED39 458 aaKnown RBP17.81■□□□□ 0.44
RDX-201ENST00000343115 GLYCTKQ8IVS8 523 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 NR1D1P20393 614 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 NMT1P30419 496 aaKnown RBP17.81■□□□□ 0.44
RDX-201ENST00000343115 BANK1Q8NDB2 785 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 POMGNT1Q8WZA1 660 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 NACC1Q96RE7 527 aa17.81■□□□□ 0.44
RDX-201ENST00000343115 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 CD19P15391 556 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 LMNB1P20700 586 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 RCSD1Q6JBY9 416 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 DYDC2Q96IM9 177 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 A6NNZ2 444 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 TUBB8Q3ZCM7 444 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 CCDC93Q567U6 631 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 RBM12Q9NTZ6 932 aaKnown RBP17.8■□□□□ 0.44
RDX-201ENST00000343115 NKIRAS1Q9NYS0 192 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 GRB10Q13322 594 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
RDX-201ENST00000343115 DCUN1D2Q6PH85 259 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 PLAAQ9Y263 795 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 FAM237AA0A1B0GTK4 181 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 GCLMP48507 274 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 STRN3Q13033 797 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 EZH2Q15910 746 aaKnown RBP17.8■□□□□ 0.44
RDX-201ENST00000343115 SEMA6BQ9H3T3 888 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 GINS2Q9Y248 185 aa17.8■□□□□ 0.44
RDX-201ENST00000343115 TNS2Q63HR2 1409 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 PDIA5Q14554 519 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 ARHGEF16Q5VV41 709 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 CCNI2Q6ZMN8 369 aaPredicted RBP17.79■□□□□ 0.44
RDX-201ENST00000343115 CEP63Q96MT8 703 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 RNF14Q9UBS8 474 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 PSMD14O00487 310 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 HNRNPDLO14979 420 aaKnown RBP17.79■□□□□ 0.44
RDX-201ENST00000343115 DESP17661 470 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 HERVK_113P62684 666 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 ANKZF1Q9H8Y5 726 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 DMGDHQ9UI17 866 aaKnown RBP17.79■□□□□ 0.44
RDX-201ENST00000343115 SCAF8Q9UPN6 1271 aaKnown RBP17.79■□□□□ 0.44
RDX-201ENST00000343115 ATP2A1O14983 1001 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 ZBED4O75132 1171 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 GAP43P17677 238 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 RSRC2Q7L4I2 434 aaKnown RBP17.79■□□□□ 0.44
RDX-201ENST00000343115 ZNF653Q96CK0 615 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 L1RE1Q9UN81 338 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 SNX24Q9Y343 169 aa17.79■□□□□ 0.44
RDX-201ENST00000343115 GPR75-ASB3A0A0A6YYF3 556 aa17.78■□□□□ 0.44
RDX-201ENST00000343115 RNF225M0QZC1 329 aaPredicted RBP17.78■□□□□ 0.44
RDX-201ENST00000343115 KRT14P02533 472 aa17.78■□□□□ 0.44
RDX-201ENST00000343115 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
RDX-201ENST00000343115 KLRC1P26715 233 aa17.78■□□□□ 0.44
RDX-201ENST00000343115 ARHGAP25P42331 645 aa17.78■□□□□ 0.44
RDX-201ENST00000343115 IRX5P78411 483 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms