RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 CKAP2LQ8IYA6 745 aa18.5■□□□□ 0.55
C11orf88-201ENST00000332814 FAM20AQ96MK3 541 aa18.5■□□□□ 0.55
C11orf88-201ENST00000332814 LTBP2Q14767 1821 aa18.5■□□□□ 0.55
C11orf88-201ENST00000332814 A0A1W2PPC1 479 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
C11orf88-201ENST00000332814 PITPNM1O00562 1244 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 TBX3O15119 743 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 ATG7O95352 703 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 SWSAP1Q6NVH7 229 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 PDXDC2PQ6P474 469 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 ABHD15Q6UXT9 468 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 MIER3Q7Z3K6 550 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 NOSTRINQ8IVI9 506 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 SLFN12Q8IYM2 578 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 TDHQ8IZJ6 230 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 ETNPPLQ8TBG4 499 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 RNPEPQ9H4A4 650 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 DISC1Q9NRI5 854 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 SETD4Q9NVD3 440 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
C11orf88-201ENST00000332814 POTEB3A0JP26 581 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 NEMFO60524 1076 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 PSMD10O75832 226 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 CSF2RAP15509 400 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 IGBP1P78318 339 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 ZNF200P98182 395 aaPredicted RBP18.48■□□□□ 0.55
C11orf88-201ENST00000332814 GRIK4Q16099 956 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 POTEBQ6S5H4 581 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 CCDC60Q8IWA6 550 aaPredicted RBP18.48■□□□□ 0.55
C11orf88-201ENST00000332814 RDM1Q8NG50 284 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 LMBR1Q8WVP7 490 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 GJA10Q969M2 543 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 PCYT2Q99447 389 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 UNC45AQ9H3U1 944 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 GABBR1Q9UBS5 961 aa18.48■□□□□ 0.55
C11orf88-201ENST00000332814 IGKV6D-21A0A0A0MT36 114 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 RRN3P2A6NIE6 340 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 CUL4AQ13619 759 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 PLCB4Q15147 1175 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 CALCRLQ16602 461 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
C11orf88-201ENST00000332814 LARP1BQ659C4 914 aaKnown RBP18.47■□□□□ 0.55
C11orf88-201ENST00000332814 SERINC5Q86VE9 423 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 WNT8AQ9H1J5 351 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 PRO3102Q9H379 93 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 KCNMB3Q9NPA1 279 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 TUBE1Q9UJT0 475 aa18.47■□□□□ 0.55
C11orf88-201ENST00000332814 TREHO43280 583 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 HSP90AA1P07900 732 aaKnown RBP18.46■□□□□ 0.55
C11orf88-201ENST00000332814 INSRRP14616 1297 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 SELPP16109 830 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 MCM7P33993 719 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 RFC2P35250 354 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 THPOP40225 353 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 PSRC1Q6PGN9 363 aaPredicted RBP18.46■□□□□ 0.55
C11orf88-201ENST00000332814 LRRC8DQ7L1W4 858 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 RSPH3Q86UC2 560 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 RPUSD2Q8IZ73 545 aaKnown RBP18.46■□□□□ 0.55
C11orf88-201ENST00000332814 ATP8B4Q8TF62 1192 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 SCLYQ96I15 445 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 FAM167AQ96KS9 214 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
C11orf88-201ENST00000332814 HBP1O60381 514 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 PFKMP08237 780 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 PDCP20941 246 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 HOXC8P31273 242 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 TRAPPC10P48553 1259 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 ORC2Q13416 577 aaPredicted RBP18.45■□□□□ 0.54
C11orf88-201ENST00000332814 TTC38Q5R3I4 469 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 TAF2Q6P1X5 1199 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 TRMT1LQ7Z2T5 733 aaKnown RBP18.45■□□□□ 0.54
C11orf88-201ENST00000332814 BBXQ8WY36 941 aaPredicted RBP18.45■□□□□ 0.54
C11orf88-201ENST00000332814 DHX38Q92620 1227 aaKnown RBP18.45■□□□□ 0.54
C11orf88-201ENST00000332814 SNX21Q969T3 373 aa18.45■□□□□ 0.54
C11orf88-201ENST00000332814 MTIF3Q9H2K0 278 aaKnown RBP18.45■□□□□ 0.54
C11orf88-201ENST00000332814 KIF28PB7ZC32 967 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 DKC1O60832 514 aaKnown RBP eCLIP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 CAND2O75155 1236 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 PARNO95453 639 aaKnown RBP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 RPLP2P05387 115 aaKnown RBP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 IQCF3P0C7M6 154 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 ACRP10323 421 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 CKBP12277 381 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 U2AF2P26368 475 aaKnown RBP eCLIP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 PPP2R5CQ13362 524 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 HIC1Q14526 733 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 NCAPH2Q6IBW4 605 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 DEFB128Q7Z7B8 93 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 RNPC3Q96LT9 517 aaKnown RBP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 CTAGE1Q96RT6 745 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 FTOQ9C0B1 505 aaKnown RBP eCLIP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 NRBP2Q9NSY0 501 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 CEP131Q9UPN4 1083 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 MAFBQ9Y5Q3 323 aaPredicted RBP18.44■□□□□ 0.54
C11orf88-201ENST00000332814 IGSF9BQ9UPX0 1349 aa18.44■□□□□ 0.54
C11orf88-201ENST00000332814 COL1A2P08123 1366 aa18.43■□□□□ 0.54
C11orf88-201ENST00000332814 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms